Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.09□□□□□ -1.12
FOXR1Q6PIV2 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.12
FOXR1Q6PIV2 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.09□□□□□ -1.12
FOXR1Q6PIV2 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.09□□□□□ -1.12
FOXR1Q6PIV2 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 CST13P-201ENST00000376992 428 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 SNORA75-201ENST00000384158 137 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 OOSP1-201ENST00000398992 1270 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 MORF4L1P1-201ENST00000404582 967 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 PPIAP25-201ENST00000420177 540 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 OR6K4P-201ENST00000423179 955 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 PTGES3P1-201ENST00000439531 483 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AL139135.2-201ENST00000445040 433 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC233982.1-201ENST00000451247 436 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 RPL23AP23-201ENST00000452590 471 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AL390026.1-201ENST00000456647 457 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AL031864.2-201ENST00000498507 350 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC108941.1-201ENST00000502853 530 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC046134.1-201ENST00000514454 666 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 PIGFP1-201ENST00000519180 653 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AP003354.1-201ENST00000523791 533 ntTSL 2 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 OR7E154P-201ENST00000525174 932 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 RNF185-AS1-201ENST00000526089 353 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 CENPUP1-201ENST00000526649 1202 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC087465.1-201ENST00000560574 245 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC022662.1-201ENST00000580252 331 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC015849.2-201ENST00000605738 409 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 IGKV3OR2-5-201ENST00000605851 281 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AL109933.4-201ENST00000612111 157 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC123788.2-201ENST00000612290 283 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC009704.2-201ENST00000618739 483 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 DUXAP9-208ENST00000622815 614 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 AC015871.5-202ENST00000623252 701 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 C8orf48-201ENST00000297324 1445 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 EEF1A1P10-201ENST00000475365 1390 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 KDELC1P1-201ENST00000512118 1509 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 TRIM51EP-201ENST00000524374 1516 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 BCL9P1-201ENST00000506012 2561 ntBASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.08□□□□□ -1.12
FOXR1Q6PIV2 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC011008.2-201ENST00000624866 3352 ntBASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
FOXR1Q6PIV2 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms