Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 RPS7P2-201ENST00000435134 607 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 AL353803.3-201ENST00000444641 335 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AL627224.1-201ENST00000448334 444 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC096743.1-201ENST00000485172 319 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 EIF4E2P2-201ENST00000492033 736 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.19□□□□□ -1.42
CLRN1P58418 BUD31P1-201ENST00000521828 359 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.19□□□□□ -1.42
CLRN1P58418 IGLVV-66-201ENST00000523818 341 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.19□□□□□ -1.42
CLRN1P58418 OR9L1P-201ENST00000529493 933 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.19□□□□□ -1.42
CLRN1P58418 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC135279.1-201ENST00000543493 504 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC016144.1-201ENST00000548175 1087 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC010735.1-201ENST00000567305 1026 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AC145350.1-201ENST00000567426 208 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.19□□□□□ -1.42
CLRN1P58418 RN7SL697P-201ENST00000582484 299 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.19□□□□□ -1.42
CLRN1P58418 AC012510.1-201ENST00000607946 759 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 AP005212.3-201ENST00000619964 528 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AC087894.3-201ENST00000623682 349 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 AC034229.6-201ENST00000623704 224 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CLRN1P58418 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.19□□□□□ -1.42
CLRN1P58418 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.19□□□□□ -1.42
CLRN1P58418 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 AC007938.1-201ENST00000562524 2902 ntBASIC6.19□□□□□ -1.42
CLRN1P58418 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.19□□□□□ -1.42
CLRN1P58418 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.19□□□□□ -1.42
CLRN1P58418 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLRN1P58418 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CLRN1P58418 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CLRN1P58418 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.18□□□□□ -1.42
CLRN1P58418 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 RN7SKP148-201ENST00000410179 275 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 TATDN1P1-201ENST00000414123 891 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.18□□□□□ -1.42
CLRN1P58418 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.18□□□□□ -1.42
CLRN1P58418 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.18□□□□□ -1.42
CLRN1P58418 CHCHD3P1-201ENST00000425516 676 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.18□□□□□ -1.42
CLRN1P58418 Z73417.1-201ENST00000447373 778 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLRN1P58418 AC114755.1-201ENST00000453101 868 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.18□□□□□ -1.42
CLRN1P58418 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CLRN1P58418 TUBBP11-201ENST00000472255 252 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 RPL5P15-201ENST00000475870 897 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 AC087672.1-201ENST00000479876 766 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 CEACAMP3-202ENST00000483806 638 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 AC021087.2-201ENST00000504656 1203 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.18□□□□□ -1.42
CLRN1P58418 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.18□□□□□ -1.42
CLRN1P58418 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.18□□□□□ -1.42
CLRN1P58418 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.18□□□□□ -1.42
CLRN1P58418 AC007537.1-201ENST00000539347 327 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.18□□□□□ -1.42
CLRN1P58418 AL512310.9-201ENST00000553311 948 ntBASIC6.18□□□□□ -1.42
CLRN1P58418 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms