Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 CUBNP3-201ENST00000457461 1784 ntBASIC6.8□□□□□ -1.32
CDH8P55286 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 AC016251.2-201ENST00000623393 3089 ntBASIC6.79□□□□□ -1.32
CDH8P55286 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 CAP1P2-201ENST00000417455 1409 ntBASIC6.79□□□□□ -1.32
CDH8P55286 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 VN1R12P-201ENST00000403778 876 ntBASIC6.79□□□□□ -1.32
CDH8P55286 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.79□□□□□ -1.32
CDH8P55286 AL139158.1-201ENST00000424719 340 ntBASIC6.79□□□□□ -1.32
CDH8P55286 CXCR2P1-202ENST00000443392 1074 ntBASIC6.79□□□□□ -1.32
CDH8P55286 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH8P55286 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH8P55286 RN7SL552P-201ENST00000462094 276 ntBASIC6.79□□□□□ -1.32
CDH8P55286 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH8P55286 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH8P55286 AC068522.1-201ENST00000482895 345 ntBASIC6.79□□□□□ -1.32
CDH8P55286 RPS27P20-201ENST00000492051 246 ntBASIC6.79□□□□□ -1.32
CDH8P55286 AC106800.3-201ENST00000511389 308 ntBASIC6.79□□□□□ -1.32
CDH8P55286 AC073581.1-201ENST00000519036 575 ntBASIC6.79□□□□□ -1.32
CDH8P55286 CYCSP25-201ENST00000525280 316 ntBASIC6.79□□□□□ -1.32
CDH8P55286 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.79□□□□□ -1.32
CDH8P55286 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.79□□□□□ -1.32
CDH8P55286 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.79□□□□□ -1.32
CDH8P55286 DPPA3P2-201ENST00000553589 478 ntBASIC6.79□□□□□ -1.32
CDH8P55286 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH8P55286 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH8P55286 OR1E3-201ENST00000575608 948 ntBASIC6.79□□□□□ -1.32
CDH8P55286 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH8P55286 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH8P55286 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.79□□□□□ -1.32
CDH8P55286 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.79□□□□□ -1.32
CDH8P55286 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CDH8P55286 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CDH8P55286 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CDH8P55286 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH8P55286 AL021877.2-201ENST00000624442 10684 ntBASIC6.79□□□□□ -1.32
CDH8P55286 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CDH8P55286 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH8P55286 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH8P55286 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
CDH8P55286 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH8P55286 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH8P55286 RNA5SP333-201ENST00000363466 118 ntBASIC6.78□□□□□ -1.32
CDH8P55286 RNA5SP334-201ENST00000364825 118 ntBASIC6.78□□□□□ -1.32
CDH8P55286 RNA5SP279-201ENST00000365513 117 ntBASIC6.78□□□□□ -1.32
CDH8P55286 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH8P55286 VN1R3-201ENST00000418822 919 ntBASIC6.78□□□□□ -1.32
CDH8P55286 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH8P55286 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH8P55286 RPS7P14-201ENST00000426405 583 ntBASIC6.78□□□□□ -1.32
CDH8P55286 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH8P55286 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH8P55286 AL451136.1-201ENST00000435399 325 ntBASIC6.78□□□□□ -1.32
CDH8P55286 EMC3-AS1-205ENST00000438698 534 ntBASIC6.78□□□□□ -1.32
CDH8P55286 AC092967.1-201ENST00000449016 481 ntBASIC6.78□□□□□ -1.32
CDH8P55286 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH8P55286 AC118758.1-202ENST00000454719 225 ntBASIC6.78□□□□□ -1.32
CDH8P55286 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH8P55286 RN7SL643P-201ENST00000471845 291 ntBASIC6.78□□□□□ -1.32
CDH8P55286 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH8P55286 RN7SL369P-201ENST00000477138 299 ntBASIC6.78□□□□□ -1.32
CDH8P55286 RPL12P31-201ENST00000478433 450 ntBASIC6.78□□□□□ -1.32
CDH8P55286 AC005017.1-201ENST00000482002 490 ntBASIC6.78□□□□□ -1.32
CDH8P55286 RN7SL714P-201ENST00000487050 298 ntBASIC6.78□□□□□ -1.32
CDH8P55286 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH8P55286 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.78□□□□□ -1.32
CDH8P55286 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH8P55286 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH8P55286 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH8P55286 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.78□□□□□ -1.32
CDH8P55286 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH8P55286 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH8P55286 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.78□□□□□ -1.32
CDH8P55286 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.78□□□□□ -1.32
CDH8P55286 MIR3154-201ENST00000577829 84 ntBASIC6.78□□□□□ -1.32
CDH8P55286 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH8P55286 AP002345.2-201ENST00000609961 904 ntBASIC6.78□□□□□ -1.32
CDH8P55286 AP005212.4-201ENST00000614206 710 ntBASIC6.78□□□□□ -1.32
CDH8P55286 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH8P55286 MIR6806-201ENST00000622141 64 ntBASIC6.78□□□□□ -1.32
CDH8P55286 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH8P55286 AL136984.1-201ENST00000607611 1893 ntBASIC6.78□□□□□ -1.32
CDH8P55286 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH8P55286 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
CDH8P55286 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
CDH8P55286 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH8P55286 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH8P55286 GUCY1B2-204ENST00000531898 1979 ntBASIC6.78□□□□□ -1.32
CDH8P55286 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CDH8P55286 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH8P55286 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH8P55286 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 232.7 ms