Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 TPTE2P2-201ENST00000403471 1466 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 PSMC1P6-201ENST00000477233 1319 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK1P53667 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
LIMK1P53667 AC104581.5-201ENST00000624171 7141 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LIMK1P53667 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LIMK1P53667 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMK1P53667 RNA5SP178-201ENST00000410380 128 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK1P53667 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMK1P53667 RPL7AP14-201ENST00000424041 802 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 PAICSP2-201ENST00000429118 1150 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK1P53667 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMK1P53667 RPL6P30-201ENST00000443382 862 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 AC097463.1-201ENST00000447288 481 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 RPL31P15-201ENST00000449770 338 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 PSMA6P2-201ENST00000457574 686 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK1P53667 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.54□□□□□ -1.36
LIMK1P53667 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMK1P53667 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.54□□□□□ -1.36
LIMK1P53667 AC004805.3-201ENST00000603178 310 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 AC129778.1-202ENST00000623812 261 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 AC073488.6-201ENST00000632293 754 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.54□□□□□ -1.36
LIMK1P53667 AL591379.1-207ENST00000635982 261 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 AC183089.2-201ENST00000637931 916 ntBASIC6.54□□□□□ -1.36
LIMK1P53667 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.54□□□□□ -1.36
LIMK1P53667 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.54□□□□□ -1.36
LIMK1P53667 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
LIMK1P53667 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
LIMK1P53667 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK1P53667 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.54□□□□□ -1.36
LIMK1P53667 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
LIMK1P53667 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK1P53667 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 CBX1P3-201ENST00000413296 527 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 RPL21P50-201ENST00000417698 477 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK1P53667 AC066692.1-201ENST00000421721 457 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AL121916.1-201ENST00000429405 308 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.53□□□□□ -1.36
LIMK1P53667 GAPDHP33-201ENST00000443168 1013 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AL161722.1-201ENST00000446972 1032 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 MYO5BP2-201ENST00000449815 1277 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AC026348.1-201ENST00000462549 1053 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.53□□□□□ -1.36
LIMK1P53667 AC018645.1-201ENST00000505003 109 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 AC008638.1-201ENST00000506035 866 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.53□□□□□ -1.36
LIMK1P53667 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 AC060775.1-201ENST00000518241 520 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.53□□□□□ -1.36
LIMK1P53667 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.53□□□□□ -1.36
LIMK1P53667 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
LIMK1P53667 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
LIMK1P53667 MIR3135A-201ENST00000578460 77 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 AC008536.1-201ENST00000602872 669 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AL512624.1-201ENST00000613638 469 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK1P53667 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 FO681491.1-202ENST00000623392 737 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.53□□□□□ -1.36
LIMK1P53667 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK1P53667 SNORA16A-202ENST00000628458 135 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 AC129915.3-201ENST00000634128 948 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 MTCO1P28-201ENST00000574177 1528 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms