Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC009120.2-204ENST00000621548 2032 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC007485.2-201ENST00000623493 1667 ntBASIC6.26□□□□□ -1.41
PDX1P52945 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 AL022323.4-201ENST00000623980 13120 ntBASIC6.26□□□□□ -1.41
PDX1P52945 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.26□□□□□ -1.41
PDX1P52945 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.26□□□□□ -1.41
PDX1P52945 DNM1P47-203ENST00000571780 12667 ntBASIC6.26□□□□□ -1.41
PDX1P52945 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.26□□□□□ -1.41
PDX1P52945 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.26□□□□□ -1.41
PDX1P52945 RNU6-167P-201ENST00000384292 106 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC017035.1-201ENST00000411999 1115 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC245452.2-201ENST00000435222 392 ntBASIC6.26□□□□□ -1.41
PDX1P52945 PNKDP1-201ENST00000435914 430 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.26□□□□□ -1.41
PDX1P52945 TVP23CP1-201ENST00000450317 639 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.26□□□□□ -1.41
PDX1P52945 OR2AF1P-201ENST00000454899 889 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC063943.2-201ENST00000495697 534 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.26□□□□□ -1.41
PDX1P52945 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 AC009879.1-201ENST00000520029 839 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.26□□□□□ -1.41
PDX1P52945 AP000662.1-201ENST00000530952 487 ntBASIC6.26□□□□□ -1.41
PDX1P52945 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.26□□□□□ -1.41
PDX1P52945 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.26□□□□□ -1.41
PDX1P52945 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.26□□□□□ -1.41
PDX1P52945 AC090826.1-203ENST00000569235 490 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC106785.4-201ENST00000569492 412 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AP005901.4-201ENST00000577336 569 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.26□□□□□ -1.41
PDX1P52945 AC139493.1-201ENST00000604368 397 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC079791.1-201ENST00000605356 973 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC091167.5-201ENST00000605689 894 ntBASIC6.26□□□□□ -1.41
PDX1P52945 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.26□□□□□ -1.41
PDX1P52945 AC108865.2-201ENST00000606881 432 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.26□□□□□ -1.41
PDX1P52945 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.26□□□□□ -1.41
PDX1P52945 LINC02495-203ENST00000636704 242 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC138627.1-204ENST00000641894 765 ntBASIC6.26□□□□□ -1.41
PDX1P52945 AC008691.1-209ENST00000642094 814 ntBASIC6.26□□□□□ -1.41
PDX1P52945 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.26□□□□□ -1.41
PDX1P52945 OR52B5P-204ENST00000641744 3467 ntBASIC6.26□□□□□ -1.41
PDX1P52945 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.26□□□□□ -1.41
PDX1P52945 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.26□□□□□ -1.41
PDX1P52945 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.26□□□□□ -1.41
PDX1P52945 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PDX1P52945 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.26□□□□□ -1.41
PDX1P52945 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PDX1P52945 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.26□□□□□ -1.41
PDX1P52945 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDX1P52945 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.26□□□□□ -1.41
PDX1P52945 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 CASC19-243ENST00000641588 1546 ntBASIC6.25□□□□□ -1.41
PDX1P52945 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.25□□□□□ -1.41
PDX1P52945 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
PDX1P52945 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
PDX1P52945 OR2M1P-201ENST00000318104 951 ntBASIC6.25□□□□□ -1.41
PDX1P52945 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PDX1P52945 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
PDX1P52945 AL157702.1-201ENST00000398764 426 ntBASIC6.25□□□□□ -1.41
PDX1P52945 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.25□□□□□ -1.41
PDX1P52945 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.25□□□□□ -1.41
PDX1P52945 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.25□□□□□ -1.41
PDX1P52945 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.25□□□□□ -1.41
PDX1P52945 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.25□□□□□ -1.41
PDX1P52945 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.25□□□□□ -1.41
PDX1P52945 AL136455.1-201ENST00000441083 1240 ntBASIC6.25□□□□□ -1.41
PDX1P52945 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.25□□□□□ -1.41
PDX1P52945 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 AC108103.1-201ENST00000511286 446 ntBASIC6.25□□□□□ -1.41
PDX1P52945 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 RNA5SP206-201ENST00000516703 121 ntBASIC6.25□□□□□ -1.41
PDX1P52945 IGKV3D-34-201ENST00000522638 302 ntBASIC6.25□□□□□ -1.41
PDX1P52945 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.25□□□□□ -1.41
PDX1P52945 NPIPB14P-203ENST00000532298 987 ntBASIC6.25□□□□□ -1.41
PDX1P52945 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.25□□□□□ -1.41
PDX1P52945 AC008055.1-201ENST00000547032 609 ntBASIC6.25□□□□□ -1.41
PDX1P52945 AC090115.2-201ENST00000548060 883 ntBASIC6.25□□□□□ -1.41
PDX1P52945 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.25□□□□□ -1.41
PDX1P52945 MIR4701-201ENST00000583094 63 ntBASIC6.25□□□□□ -1.41
PDX1P52945 RN7SL475P-201ENST00000583379 298 ntBASIC6.25□□□□□ -1.41
PDX1P52945 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.25□□□□□ -1.41
PDX1P52945 AL049840.5-201ENST00000602827 552 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms