Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SRP9P49458 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SRP9P49458 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SRP9P49458 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SRP9P49458 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SRP9P49458 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
SRP9P49458 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SRP9P49458 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.65□□□□□ -1.5
SRP9P49458 AC010894.1-201ENST00000313760 361 ntBASIC5.65□□□□□ -1.5
SRP9P49458 AL023284.3-201ENST00000407767 334 ntBASIC5.65□□□□□ -1.5
SRP9P49458 RN7SKP161-201ENST00000411110 305 ntBASIC5.65□□□□□ -1.5
SRP9P49458 RNA5SP155-201ENST00000411154 129 ntBASIC5.65□□□□□ -1.5
SRP9P49458 RPS26P38-201ENST00000414476 348 ntBASIC5.65□□□□□ -1.5
SRP9P49458 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.65□□□□□ -1.5
SRP9P49458 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.65□□□□□ -1.5
SRP9P49458 Z68868.1-201ENST00000429048 544 ntBASIC5.65□□□□□ -1.5
SRP9P49458 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.65□□□□□ -1.5
SRP9P49458 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SRP9P49458 AL121578.2-201ENST00000448797 447 ntBASIC5.65□□□□□ -1.5
SRP9P49458 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SRP9P49458 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.65□□□□□ -1.5
SRP9P49458 AKR1D1P1-201ENST00000457236 936 ntBASIC5.65□□□□□ -1.5
SRP9P49458 AC099340.1-201ENST00000475247 599 ntBASIC5.65□□□□□ -1.5
SRP9P49458 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.65□□□□□ -1.5
SRP9P49458 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.65□□□□□ -1.5
SRP9P49458 OR52H2P-201ENST00000514607 902 ntBASIC5.65□□□□□ -1.5
SRP9P49458 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SRP9P49458 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.65□□□□□ -1.5
SRP9P49458 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.65□□□□□ -1.5
SRP9P49458 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SRP9P49458 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.65□□□□□ -1.5
SRP9P49458 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.65□□□□□ -1.5
SRP9P49458 AL162632.2-201ENST00000553933 399 ntBASIC5.65□□□□□ -1.5
SRP9P49458 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.65□□□□□ -1.5
SRP9P49458 HMGN1P26-201ENST00000558737 303 ntBASIC5.65□□□□□ -1.5
SRP9P49458 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.65□□□□□ -1.5
SRP9P49458 OR4C49P-201ENST00000563891 900 ntBASIC5.65□□□□□ -1.5
SRP9P49458 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.65□□□□□ -1.5
SRP9P49458 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.65□□□□□ -1.5
SRP9P49458 MIR4433B-201ENST00000581329 102 ntBASIC5.65□□□□□ -1.5
SRP9P49458 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.65□□□□□ -1.5
SRP9P49458 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.65□□□□□ -1.5
SRP9P49458 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.65□□□□□ -1.5
SRP9P49458 LSM1P2-201ENST00000604911 322 ntBASIC5.65□□□□□ -1.5
SRP9P49458 AC024589.2-201ENST00000605642 1294 ntBASIC5.65□□□□□ -1.5
SRP9P49458 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.65□□□□□ -1.5
SRP9P49458 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.65□□□□□ -1.5
SRP9P49458 AL121936.2-201ENST00000641935 662 ntBASIC5.65□□□□□ -1.5
SRP9P49458 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.65□□□□□ -1.51
SRP9P49458 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SRP9P49458 NEK2P2-201ENST00000438441 1338 ntBASIC5.65□□□□□ -1.51
SRP9P49458 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SRP9P49458 PSMC1P4-201ENST00000515236 1327 ntBASIC5.65□□□□□ -1.51
SRP9P49458 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SRP9P49458 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SRP9P49458 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.65□□□□□ -1.51
SRP9P49458 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SRP9P49458 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SRP9P49458 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SRP9P49458 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
SRP9P49458 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SRP9P49458 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SRP9P49458 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.64□□□□□ -1.51
SRP9P49458 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SRP9P49458 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.64□□□□□ -1.51
SRP9P49458 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
SRP9P49458 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.64□□□□□ -1.51
SRP9P49458 RNU1-5P-201ENST00000362684 144 ntBASIC5.64□□□□□ -1.51
SRP9P49458 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SRP9P49458 RANP6-201ENST00000413691 644 ntBASIC5.64□□□□□ -1.51
SRP9P49458 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.64□□□□□ -1.51
SRP9P49458 REREP1Y-201ENST00000422655 198 ntBASIC5.64□□□□□ -1.51
SRP9P49458 AC021876.1-201ENST00000425959 359 ntBASIC5.64□□□□□ -1.51
SRP9P49458 REREP2Y-201ENST00000439103 200 ntBASIC5.64□□□□□ -1.51
SRP9P49458 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.64□□□□□ -1.51
SRP9P49458 AL445991.1-201ENST00000450381 475 ntBASIC5.64□□□□□ -1.51
SRP9P49458 AL034369.1-201ENST00000453808 477 ntBASIC5.64□□□□□ -1.51
SRP9P49458 AC063955.1-201ENST00000462872 685 ntBASIC5.64□□□□□ -1.51
SRP9P49458 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.64□□□□□ -1.51
SRP9P49458 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SRP9P49458 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.64□□□□□ -1.51
SRP9P49458 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.64□□□□□ -1.51
SRP9P49458 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.64□□□□□ -1.51
SRP9P49458 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.64□□□□□ -1.51
SRP9P49458 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.64□□□□□ -1.51
SRP9P49458 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.64□□□□□ -1.51
SRP9P49458 AC084851.2-201ENST00000530377 364 ntBASIC5.64□□□□□ -1.51
SRP9P49458 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.64□□□□□ -1.51
SRP9P49458 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.64□□□□□ -1.51
SRP9P49458 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.64□□□□□ -1.51
SRP9P49458 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.64□□□□□ -1.51
SRP9P49458 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.64□□□□□ -1.51
SRP9P49458 OR7A8P-201ENST00000595427 913 ntBASIC5.64□□□□□ -1.51
SRP9P49458 AC025171.4-201ENST00000607250 1047 ntBASIC5.64□□□□□ -1.51
SRP9P49458 AC005277.2-201ENST00000617898 390 ntBASIC5.64□□□□□ -1.51
SRP9P49458 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms