Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HNF4AP41235 AP003486.1-201ENST00000525716 3994 ntBASIC6.33□□□□□ -1.4
HNF4AP41235 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HNF4AP41235 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.32□□□□□ -1.4
HNF4AP41235 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 AC006213.6-201ENST00000623722 4179 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.32□□□□□ -1.4
HNF4AP41235 OR7A2P-201ENST00000304105 930 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
HNF4AP41235 RNA5SP140-201ENST00000364524 92 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 AC019178.1-201ENST00000392337 440 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.32□□□□□ -1.4
HNF4AP41235 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.32□□□□□ -1.4
HNF4AP41235 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.32□□□□□ -1.4
HNF4AP41235 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.32□□□□□ -1.4
HNF4AP41235 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.32□□□□□ -1.4
HNF4AP41235 PRUNEP1-201ENST00000425846 705 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 BTG3P1-201ENST00000435859 716 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 RPSAP24-201ENST00000461543 873 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.32□□□□□ -1.4
HNF4AP41235 AC091965.3-201ENST00000506236 208 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 AC131392.1-201ENST00000506490 633 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 MRPL57P6-201ENST00000506570 309 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 RFPL4AP3-201ENST00000515267 345 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 SCARNA5-201ENST00000516201 276 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.32□□□□□ -1.4
HNF4AP41235 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HNF4AP41235 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.32□□□□□ -1.4
HNF4AP41235 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 RN7SL208P-201ENST00000577964 296 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.32□□□□□ -1.4
HNF4AP41235 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 AC116165.3-201ENST00000614524 400 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 AP001885.1-201ENST00000621658 558 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 AC073488.9-201ENST00000631601 754 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 Z83820.1-201ENST00000456978 1499 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HNF4AP41235 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
HNF4AP41235 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.32□□□□□ -1.4
HNF4AP41235 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.32□□□□□ -1.4
HNF4AP41235 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.32□□□□□ -1.4
HNF4AP41235 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.32□□□□□ -1.4
HNF4AP41235 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 AC112255.1-201ENST00000624070 2493 ntBASIC6.32□□□□□ -1.4
HNF4AP41235 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.32□□□□□ -1.4
HNF4AP41235 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HNF4AP41235 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.31□□□□□ -1.4
HNF4AP41235 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.31□□□□□ -1.4
HNF4AP41235 AC007159.1-201ENST00000566529 4706 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HNF4AP41235 PROS2P-201ENST00000474651 1951 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 SAMMSON-210ENST00000641260 1308 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.31□□□□□ -1.4
HNF4AP41235 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HNF4AP41235 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.31□□□□□ -1.4
HNF4AP41235 AKAP17BP-201ENST00000431706 2719 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.31□□□□□ -1.4
HNF4AP41235 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HNF4AP41235 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.31□□□□□ -1.4
HNF4AP41235 RPL12P23-201ENST00000405880 490 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 RPL23AP18-201ENST00000416139 468 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HNF4AP41235 RPL23AP85-201ENST00000421838 433 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 SPATA20P1-201ENST00000423089 438 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 AL034379.1-201ENST00000423216 253 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 VN1R53P-201ENST00000429536 957 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 PA2G4P1-201ENST00000442248 1197 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 AC073072.2-201ENST00000447425 348 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 NPM1P9-201ENST00000453156 844 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 RPL31P11-202ENST00000454082 372 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 AKR1D1P1-201ENST00000457236 936 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms