Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.15□□□□□ -1.42
ABCD3P28288 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.15□□□□□ -1.42
ABCD3P28288 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.15□□□□□ -1.42
ABCD3P28288 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.15□□□□□ -1.42
ABCD3P28288 AC005519.1-201ENST00000554490 601 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 AC106785.4-201ENST00000569492 412 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.15□□□□□ -1.42
ABCD3P28288 AC015818.6-201ENST00000584274 634 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.15□□□□□ -1.42
ABCD3P28288 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.15□□□□□ -1.42
ABCD3P28288 AC012213.4-201ENST00000606457 354 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.15□□□□□ -1.42
ABCD3P28288 AL592494.3-201ENST00000609485 464 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCD3P28288 AC006213.5-201ENST00000619673 288 ntBASIC6.15□□□□□ -1.42
ABCD3P28288 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.15□□□□□ -1.42
ABCD3P28288 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.15□□□□□ -1.42
ABCD3P28288 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ABCD3P28288 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.15□□□□□ -1.43
ABCD3P28288 SNX18P3-202ENST00000565670 1750 ntBASIC6.15□□□□□ -1.43
ABCD3P28288 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.15□□□□□ -1.43
ABCD3P28288 AL596244.1-201ENST00000567068 3779 ntBASIC6.15□□□□□ -1.43
ABCD3P28288 AC067942.1-201ENST00000488045 1493 ntBASIC6.15□□□□□ -1.43
ABCD3P28288 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ABCD3P28288 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ABCD3P28288 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ABCD3P28288 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.14□□□□□ -1.43
ABCD3P28288 AC003985.2-201ENST00000562268 1669 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.14□□□□□ -1.43
ABCD3P28288 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ABCD3P28288 RNA5SP308-201ENST00000362532 115 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 RNA5SP140-201ENST00000364524 92 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 OR13C3-201ENST00000374781 1108 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 SNORA7A-201ENST00000384765 139 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
ABCD3P28288 AL049697.3-201ENST00000406493 982 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 RNA5SP155-201ENST00000411154 129 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 MTND4LP17-201ENST00000414607 293 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 RNF19BPX-201ENST00000426224 625 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 AL596268.1-201ENST00000427910 1048 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 ZFAND6P1-201ENST00000434138 605 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 UBBP5-201ENST00000446970 266 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 BUD31P2-201ENST00000449374 300 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.14□□□□□ -1.43
ABCD3P28288 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.14□□□□□ -1.43
ABCD3P28288 RN7SL83P-201ENST00000468131 297 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 AP003385.3-201ENST00000472498 287 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 FTH1P8-201ENST00000498161 514 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.14□□□□□ -1.43
ABCD3P28288 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.14□□□□□ -1.43
ABCD3P28288 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 AC084851.2-201ENST00000530377 364 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.14□□□□□ -1.43
ABCD3P28288 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.14□□□□□ -1.43
ABCD3P28288 AP001804.2-201ENST00000533932 910 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 AC008147.3-201ENST00000548666 354 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.14□□□□□ -1.43
ABCD3P28288 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 MIR7854-201ENST00000620068 65 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 CLUHP10-201ENST00000631979 980 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ABCD3P28288 PSMC1P6-201ENST00000477233 1319 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 PSMC1P4-201ENST00000515236 1327 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
ABCD3P28288 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ABCD3P28288 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.14□□□□□ -1.43
ABCD3P28288 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.14□□□□□ -1.43
ABCD3P28288 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
ABCD3P28288 AC007485.2-201ENST00000623493 1667 ntBASIC6.14□□□□□ -1.43
ABCD3P28288 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms