Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC010487.1-201ENST00000594408 1172 ntBASIC5.44□□□□□ -1.54
HLA-DMAP28067 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DMAP28067 AC104117.5-201ENST00000606195 547 ntBASIC5.44□□□□□ -1.54
HLA-DMAP28067 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DMAP28067 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DMAP28067 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
HLA-DMAP28067 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DMAP28067 AL034546.1-201ENST00000623740 3693 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 MAPK10-338ENST00000641647 3362 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DMAP28067 RPS2P45-201ENST00000469997 2057 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC023886.2-201ENST00000321285 411 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DMAP28067 RNU12-2P-201ENST00000364789 156 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 RN7SKP69-201ENST00000365390 305 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 MRPS21P5-201ENST00000417885 231 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 DPPA2P2-201ENST00000418220 897 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 RPS10P21-201ENST00000430654 475 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 NIP7P1-201ENST00000433227 512 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 SNRPBP1-201ENST00000443634 282 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC005017.1-201ENST00000482002 490 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 OR52H2P-201ENST00000514607 902 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 BCAS2P1-201ENST00000528022 632 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 OR4A43P-201ENST00000532938 908 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 AL132640.1-201ENST00000559594 619 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 BMS1P8-201ENST00000565049 1178 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 MIR3189-201ENST00000578735 73 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 MIR4428-201ENST00000584884 73 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC010503.3-201ENST00000594355 540 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 PTCHD3P1-201ENST00000612350 537 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 AL591135.1-201ENST00000401578 5914 ntBASIC5.43□□□□□ -1.54
HLA-DMAP28067 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DMAP28067 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DMAP28067 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DMAP28067 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DMAP28067 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DMAP28067 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HLA-DMAP28067 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DMAP28067 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DMAP28067 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC096921.2-201ENST00000561507 1916 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 PARP4P2-201ENST00000446672 3326 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 BCORP1-203ENST00000513194 5093 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 MIR128-2-201ENST00000384893 84 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 RNA5SP176-201ENST00000390956 110 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 RNU11-6P-201ENST00000391127 133 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 RN7SKP268-201ENST00000411107 316 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC092066.1-201ENST00000425131 317 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC090954.1-201ENST00000445502 361 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 NDUFB4P1-201ENST00000462398 381 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 MORF4L2P1-201ENST00000503761 858 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC105420.1-201ENST00000504389 582 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC111000.6-201ENST00000514471 709 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC008429.2-201ENST00000523057 864 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms