Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
CTLA4P16410 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CTLA4P16410 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.54□□□□□ -1.52
CTLA4P16410 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTLA4P16410 SSR1P1-201ENST00000407630 814 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.54□□□□□ -1.52
CTLA4P16410 MTND4LP17-201ENST00000414607 293 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.54□□□□□ -1.52
CTLA4P16410 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.54□□□□□ -1.52
CTLA4P16410 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.54□□□□□ -1.52
CTLA4P16410 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.54□□□□□ -1.52
CTLA4P16410 AL031681.1-201ENST00000443304 400 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.54□□□□□ -1.52
CTLA4P16410 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.54□□□□□ -1.52
CTLA4P16410 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.54□□□□□ -1.52
CTLA4P16410 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.54□□□□□ -1.52
CTLA4P16410 AC073594.1-201ENST00000462065 364 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 RN7SL39P-201ENST00000462264 297 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.54□□□□□ -1.52
CTLA4P16410 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.54□□□□□ -1.52
CTLA4P16410 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTLA4P16410 AP001804.1-201ENST00000526868 919 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 AC135983.3-201ENST00000528049 1226 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.54□□□□□ -1.52
CTLA4P16410 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.54□□□□□ -1.52
CTLA4P16410 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.54□□□□□ -1.52
CTLA4P16410 AC007494.1-201ENST00000562293 760 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 AC090651.1-201ENST00000567865 634 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.54□□□□□ -1.52
CTLA4P16410 DYNLL1P1-201ENST00000595442 269 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 AL589765.6-201ENST00000601909 549 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 MIR6885-201ENST00000612241 66 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 AL162377.2-201ENST00000624532 337 ntBASIC5.54□□□□□ -1.52
CTLA4P16410 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTLA4P16410 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.54□□□□□ -1.52
CTLA4P16410 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTLA4P16410 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CTLA4P16410 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTLA4P16410 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTLA4P16410 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CTLA4P16410 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTLA4P16410 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CTLA4P16410 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.54□□□□□ -1.52
CTLA4P16410 AC079248.1-201ENST00000427568 1546 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.53□□□□□ -1.52
CTLA4P16410 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CTLA4P16410 AL121768.1-201ENST00000613917 2544 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.53□□□□□ -1.52
CTLA4P16410 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 AP002833.3-201ENST00000625075 2265 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.53□□□□□ -1.52
CTLA4P16410 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CTLA4P16410 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CTLA4P16410 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CTLA4P16410 SNORA43.1-201ENST00000364863 140 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 RN7SKP121-201ENST00000410842 305 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.53□□□□□ -1.52
CTLA4P16410 AC112492.2-201ENST00000432774 1030 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.53□□□□□ -1.52
CTLA4P16410 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.53□□□□□ -1.52
CTLA4P16410 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.53□□□□□ -1.52
CTLA4P16410 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.53□□□□□ -1.52
CTLA4P16410 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.53□□□□□ -1.52
CTLA4P16410 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.53□□□□□ -1.52
CTLA4P16410 AL445991.1-201ENST00000450381 475 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 AC112187.1-201ENST00000455837 479 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.53□□□□□ -1.52
CTLA4P16410 SLC25A51P1-201ENST00000468432 871 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 RN7SL326P-201ENST00000477493 296 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 RPL12P31-201ENST00000478433 450 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 RPS4XP17-201ENST00000479057 754 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.53□□□□□ -1.52
CTLA4P16410 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.53□□□□□ -1.52
CTLA4P16410 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.53□□□□□ -1.52
CTLA4P16410 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.53□□□□□ -1.52
CTLA4P16410 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.53□□□□□ -1.52
CTLA4P16410 AC124891.1-201ENST00000536322 519 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 AC092865.1-201ENST00000544395 1023 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 HMGN1P26-201ENST00000558737 303 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.53□□□□□ -1.52
CTLA4P16410 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.53□□□□□ -1.52
CTLA4P16410 AC027334.1-201ENST00000603257 310 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 AP003789.1-201ENST00000617737 605 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 OR7A1P-202ENST00000641542 1158 ntBASIC5.53□□□□□ -1.52
CTLA4P16410 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CTLA4P16410 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.53□□□□□ -1.52
CTLA4P16410 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.53□□□□□ -1.52
CTLA4P16410 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTLA4P16410 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms