Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RN7SL413P-201ENST00000482700 297 ntBASIC6.26□□□□□ -1.41
CDH1P12830 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH1P12830 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH1P12830 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.26□□□□□ -1.41
CDH1P12830 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH1P12830 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH1P12830 IGHV1-14-201ENST00000523391 241 ntBASIC6.26□□□□□ -1.41
CDH1P12830 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH1P12830 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CDH1P12830 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDH1P12830 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH1P12830 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH1P12830 AC133552.4-201ENST00000576103 676 ntBASIC6.26□□□□□ -1.41
CDH1P12830 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH1P12830 MIR4732-201ENST00000581873 76 ntBASIC6.26□□□□□ -1.41
CDH1P12830 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH1P12830 AC004805.3-201ENST00000603178 310 ntBASIC6.26□□□□□ -1.41
CDH1P12830 AL161912.3-201ENST00000605404 628 ntBASIC6.26□□□□□ -1.41
CDH1P12830 AC019257.2-201ENST00000605539 497 ntBASIC6.26□□□□□ -1.41
CDH1P12830 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH1P12830 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH1P12830 AC005899.6-201ENST00000620729 297 ntBASIC6.26□□□□□ -1.41
CDH1P12830 AC068213.1-201ENST00000625124 226 ntBASIC6.26□□□□□ -1.41
CDH1P12830 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH1P12830 AC007342.9-201ENST00000623877 1385 ntBASIC6.26□□□□□ -1.41
CDH1P12830 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH1P12830 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH1P12830 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH1P12830 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH1P12830 AC074141.1-201ENST00000588129 2995 ntBASIC6.26□□□□□ -1.41
CDH1P12830 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH1P12830 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 AC005702.3-201ENST00000585345 1447 ntBASIC6.25□□□□□ -1.41
CDH1P12830 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH1P12830 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH1P12830 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 AP000432.2-201ENST00000624164 2048 ntBASIC6.25□□□□□ -1.41
CDH1P12830 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH1P12830 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CDH1P12830 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CDH1P12830 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CDH1P12830 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 RNA5SP85-201ENST00000365378 119 ntBASIC6.25□□□□□ -1.41
CDH1P12830 RNU1-84P-201ENST00000365447 164 ntBASIC6.25□□□□□ -1.41
CDH1P12830 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.25□□□□□ -1.41
CDH1P12830 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH1P12830 RN7SKP221-201ENST00000410420 301 ntBASIC6.25□□□□□ -1.41
CDH1P12830 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH1P12830 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH1P12830 DNAJC19P5-201ENST00000443295 316 ntBASIC6.25□□□□□ -1.41
CDH1P12830 AL031681.1-201ENST00000443304 400 ntBASIC6.25□□□□□ -1.41
CDH1P12830 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH1P12830 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH1P12830 AC114324.2-202ENST00000503812 134 ntBASIC6.25□□□□□ -1.41
CDH1P12830 AC091965.3-201ENST00000506236 208 ntBASIC6.25□□□□□ -1.41
CDH1P12830 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH1P12830 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH1P12830 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH1P12830 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH1P12830 MIR744-201ENST00000578242 98 ntBASIC6.25□□□□□ -1.41
CDH1P12830 RN7SL66P-201ENST00000582099 264 ntBASIC6.25□□□□□ -1.41
CDH1P12830 SYPL1P2-201ENST00000582878 727 ntBASIC6.25□□□□□ -1.41
CDH1P12830 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH1P12830 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH1P12830 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH1P12830 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CDH1P12830 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
CDH1P12830 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CDH1P12830 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 SMG1P5-202ENST00000529428 4219 ntBASIC6.25□□□□□ -1.41
CDH1P12830 SMG1P2-201ENST00000566127 4221 ntBASIC6.25□□□□□ -1.41
CDH1P12830 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH1P12830 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 SAGE3P-201ENST00000619800 1635 ntBASIC6.25□□□□□ -1.41
CDH1P12830 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CDH1P12830 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CDH1P12830 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH1P12830 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH1P12830 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CDH1P12830 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH1P12830 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CDH1P12830 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDH1P12830 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH1P12830 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDH1P12830 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDH1P12830 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH1P12830 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH1P12830 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH1P12830 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH1P12830 LCN1P2-201ENST00000372030 223 ntBASIC6.24□□□□□ -1.41
CDH1P12830 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH1P12830 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH1P12830 RPL34P27-201ENST00000428810 349 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms