Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CD48P09326 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 AC093297.3-201ENST00000607056 2517 ntBASIC6.5□□□□□ -1.37
CD48P09326 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 LCN1P2-201ENST00000372030 223 ntBASIC6.5□□□□□ -1.37
CD48P09326 RPL7P58-201ENST00000402913 758 ntBASIC6.5□□□□□ -1.37
CD48P09326 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 RPS17P17-201ENST00000419392 409 ntBASIC6.5□□□□□ -1.37
CD48P09326 AC007562.1-201ENST00000421819 517 ntBASIC6.5□□□□□ -1.37
CD48P09326 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.5□□□□□ -1.37
CD48P09326 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.5□□□□□ -1.37
CD48P09326 AC023274.2-201ENST00000445264 521 ntBASIC6.5□□□□□ -1.37
CD48P09326 RBMY2HP-201ENST00000457961 720 ntBASIC6.5□□□□□ -1.37
CD48P09326 AC073594.1-201ENST00000462065 364 ntBASIC6.5□□□□□ -1.37
CD48P09326 RPL12P31-201ENST00000478433 450 ntBASIC6.5□□□□□ -1.37
CD48P09326 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 AC113191.1-201ENST00000517759 403 ntBASIC6.5□□□□□ -1.37
CD48P09326 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.5□□□□□ -1.37
CD48P09326 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.5□□□□□ -1.37
CD48P09326 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.5□□□□□ -1.37
CD48P09326 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.5□□□□□ -1.37
CD48P09326 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.5□□□□□ -1.37
CD48P09326 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.5□□□□□ -1.37
CD48P09326 AC012368.3-201ENST00000604190 219 ntBASIC6.5□□□□□ -1.37
CD48P09326 AL591167.1-201ENST00000607321 456 ntBASIC6.5□□□□□ -1.37
CD48P09326 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.5□□□□□ -1.37
CD48P09326 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 MIR6823-201ENST00000622118 61 ntBASIC6.5□□□□□ -1.37
CD48P09326 AL138693.1-201ENST00000622219 129 ntBASIC6.5□□□□□ -1.37
CD48P09326 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.5□□□□□ -1.37
CD48P09326 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CD48P09326 AC096921.2-201ENST00000561507 1916 ntBASIC6.5□□□□□ -1.37
CD48P09326 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD48P09326 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.49□□□□□ -1.37
CD48P09326 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.49□□□□□ -1.37
CD48P09326 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD48P09326 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.49□□□□□ -1.37
CD48P09326 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CD48P09326 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.49□□□□□ -1.37
CD48P09326 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CD48P09326 RPL11P4-201ENST00000332269 436 ntBASIC6.49□□□□□ -1.37
CD48P09326 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CD48P09326 MTND2P12-201ENST00000417560 1252 ntBASIC6.49□□□□□ -1.37
CD48P09326 OSTCP4-201ENST00000424397 449 ntBASIC6.49□□□□□ -1.37
CD48P09326 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD48P09326 AC112492.2-201ENST00000432774 1030 ntBASIC6.49□□□□□ -1.37
CD48P09326 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD48P09326 OR2L9P-201ENST00000444456 913 ntBASIC6.49□□□□□ -1.37
CD48P09326 OR13K1P-201ENST00000444577 975 ntBASIC6.49□□□□□ -1.37
CD48P09326 AL445991.1-201ENST00000450381 475 ntBASIC6.49□□□□□ -1.37
CD48P09326 RANP2-201ENST00000456833 229 ntBASIC6.49□□□□□ -1.37
CD48P09326 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.49□□□□□ -1.37
CD48P09326 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.49□□□□□ -1.37
CD48P09326 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.49□□□□□ -1.37
CD48P09326 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.49□□□□□ -1.37
CD48P09326 MRPL57P6-201ENST00000506570 309 ntBASIC6.49□□□□□ -1.37
CD48P09326 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.49□□□□□ -1.37
CD48P09326 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.49□□□□□ -1.37
CD48P09326 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.49□□□□□ -1.37
CD48P09326 AC124891.1-201ENST00000536322 519 ntBASIC6.49□□□□□ -1.37
CD48P09326 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.49□□□□□ -1.37
CD48P09326 TDGP1-201ENST00000543961 1229 ntBASIC6.49□□□□□ -1.37
CD48P09326 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.49□□□□□ -1.37
CD48P09326 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.49□□□□□ -1.37
CD48P09326 NPIPB1P-202ENST00000588786 828 ntBASIC6.49□□□□□ -1.37
CD48P09326 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.49□□□□□ -1.37
CD48P09326 OR7A1P-202ENST00000641542 1158 ntBASIC6.49□□□□□ -1.37
CD48P09326 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.49□□□□□ -1.37
CD48P09326 VN2R1P-201ENST00000449668 1743 ntBASIC6.49□□□□□ -1.37
CD48P09326 AC009831.5-201ENST00000624000 3189 ntBASIC6.49□□□□□ -1.37
CD48P09326 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD48P09326 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.49□□□□□ -1.37
CD48P09326 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CD48P09326 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD48P09326 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CD48P09326 AL121768.1-201ENST00000613917 2544 ntBASIC6.49□□□□□ -1.37
CD48P09326 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.49□□□□□ -1.37
CD48P09326 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CD48P09326 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC6.49□□□□□ -1.37
CD48P09326 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CD48P09326 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.49□□□□□ -1.37
CD48P09326 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.49□□□□□ -1.37
CD48P09326 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms