Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.88□□□□□ -1.31
RB1P06400 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RB1P06400 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RB1P06400 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RB1P06400 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RB1P06400 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.88□□□□□ -1.31
RB1P06400 AL354854.1-201ENST00000455940 1363 ntBASIC6.88□□□□□ -1.31
RB1P06400 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.88□□□□□ -1.31
RB1P06400 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RB1P06400 MIR199B-201ENST00000384849 110 ntBASIC6.88□□□□□ -1.31
RB1P06400 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.88□□□□□ -1.31
RB1P06400 RN7SKP281-201ENST00000410472 352 ntBASIC6.88□□□□□ -1.31
RB1P06400 CDY8P-201ENST00000428380 1279 ntBASIC6.88□□□□□ -1.31
RB1P06400 AC112492.2-201ENST00000432774 1030 ntBASIC6.88□□□□□ -1.31
RB1P06400 SOCS5P1-201ENST00000440415 949 ntBASIC6.88□□□□□ -1.31
RB1P06400 CDY20P-201ENST00000447528 1279 ntBASIC6.88□□□□□ -1.31
RB1P06400 PPIAP7-201ENST00000454070 489 ntBASIC6.88□□□□□ -1.31
RB1P06400 RPL5P16-201ENST00000471467 790 ntBASIC6.88□□□□□ -1.31
RB1P06400 AC098847.1-201ENST00000473094 348 ntBASIC6.88□□□□□ -1.31
RB1P06400 AC022826.1-201ENST00000519383 805 ntBASIC6.88□□□□□ -1.31
RB1P06400 AP000620.1-201ENST00000527147 504 ntBASIC6.88□□□□□ -1.31
RB1P06400 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.88□□□□□ -1.31
RB1P06400 AP001264.1-201ENST00000620602 703 ntBASIC6.88□□□□□ -1.31
RB1P06400 AC127024.6-201ENST00000621598 424 ntBASIC6.88□□□□□ -1.31
RB1P06400 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.88□□□□□ -1.31
RB1P06400 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RB1P06400 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
RB1P06400 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.88□□□□□ -1.31
RB1P06400 AC023245.2-201ENST00000530760 2978 ntBASIC6.88□□□□□ -1.31
RB1P06400 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RB1P06400 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RB1P06400 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.88□□□□□ -1.31
RB1P06400 AC132219.2-201ENST00000624416 2327 ntBASIC6.88□□□□□ -1.31
RB1P06400 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.88□□□□□ -1.31
RB1P06400 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RB1P06400 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RB1P06400 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
RB1P06400 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
RB1P06400 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RB1P06400 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RB1P06400 CASC19-238ENST00000641523 1558 ntBASIC6.87□□□□□ -1.31
RB1P06400 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.87□□□□□ -1.31
RB1P06400 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.87□□□□□ -1.31
RB1P06400 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.87□□□□□ -1.31
RB1P06400 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.87□□□□□ -1.31
RB1P06400 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RB1P06400 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RB1P06400 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RB1P06400 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
RB1P06400 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RB1P06400 SNORD16-201ENST00000362803 99 ntBASIC6.87□□□□□ -1.31
RB1P06400 AC003989.1-201ENST00000434569 565 ntBASIC6.87□□□□□ -1.31
RB1P06400 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.87□□□□□ -1.31
RB1P06400 AC007998.1-201ENST00000474156 672 ntBASIC6.87□□□□□ -1.31
RB1P06400 RN7SL705P-201ENST00000481678 294 ntBASIC6.87□□□□□ -1.31
RB1P06400 AC117395.1-201ENST00000487390 403 ntBASIC6.87□□□□□ -1.31
RB1P06400 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.87□□□□□ -1.31
RB1P06400 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.87□□□□□ -1.31
RB1P06400 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.87□□□□□ -1.31
RB1P06400 FXNP1-201ENST00000555153 337 ntBASIC6.87□□□□□ -1.31
RB1P06400 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.87□□□□□ -1.31
RB1P06400 AC007956.1-201ENST00000555623 542 ntBASIC6.87□□□□□ -1.31
RB1P06400 AC007346.1-201ENST00000569208 867 ntBASIC6.87□□□□□ -1.31
RB1P06400 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.87□□□□□ -1.31
RB1P06400 MIR4443-201ENST00000585052 53 ntBASIC6.87□□□□□ -1.31
RB1P06400 AC008555.7-201ENST00000605008 583 ntBASIC6.87□□□□□ -1.31
RB1P06400 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.87□□□□□ -1.31
RB1P06400 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.87□□□□□ -1.31
RB1P06400 TSHZ2-205ENST00000626626 670 ntBASIC6.87□□□□□ -1.31
RB1P06400 OR7E91P-202ENST00000642062 1198 ntBASIC6.87□□□□□ -1.31
RB1P06400 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.87□□□□□ -1.31
RB1P06400 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
RB1P06400 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RB1P06400 MTCO1P25-201ENST00000414449 1799 ntBASIC6.87□□□□□ -1.31
RB1P06400 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RB1P06400 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RB1P06400 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.87□□□□□ -1.31
RB1P06400 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
RB1P06400 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RB1P06400 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RB1P06400 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.86□□□□□ -1.31
RB1P06400 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RB1P06400 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RB1P06400 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RB1P06400 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RB1P06400 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.86□□□□□ -1.31
RB1P06400 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
RB1P06400 MIR323A-201ENST00000362199 86 ntBASIC6.86□□□□□ -1.31
RB1P06400 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
RB1P06400 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
RB1P06400 RN7SKP144-201ENST00000411108 279 ntBASIC6.86□□□□□ -1.31
RB1P06400 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.86□□□□□ -1.31
RB1P06400 AC008753.1-201ENST00000423096 284 ntBASIC6.86□□□□□ -1.31
RB1P06400 RPL12P12-201ENST00000424633 501 ntBASIC6.86□□□□□ -1.31
RB1P06400 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.86□□□□□ -1.31
RB1P06400 MTND6P12-201ENST00000428247 522 ntBASIC6.86□□□□□ -1.31
RB1P06400 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.86□□□□□ -1.31
RB1P06400 MTND4LP12-201ENST00000448237 295 ntBASIC6.86□□□□□ -1.31
RB1P06400 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.86□□□□□ -1.31
RB1P06400 AC074386.1-201ENST00000476560 767 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms