Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC093635.1-201ENST00000609028 555 ntBASIC5.32□□□□□ -1.56
UPK1BO75841 FAM27E3-202ENST00000614611 340 ntBASIC5.32□□□□□ -1.56
UPK1BO75841 MIR6776-201ENST00000616678 59 ntBASIC5.32□□□□□ -1.56
UPK1BO75841 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1BO75841 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.32□□□□□ -1.56
UPK1BO75841 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.32□□□□□ -1.56
UPK1BO75841 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.32□□□□□ -1.56
UPK1BO75841 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1BO75841 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1BO75841 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1BO75841 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1BO75841 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
UPK1BO75841 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1BO75841 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.32□□□□□ -1.56
UPK1BO75841 AL442128.2-201ENST00000620246 1824 ntBASIC5.32□□□□□ -1.56
UPK1BO75841 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1BO75841 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.32□□□□□ -1.56
UPK1BO75841 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.32□□□□□ -1.56
UPK1BO75841 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPK1BO75841 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.31□□□□□ -1.56
UPK1BO75841 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC5.31□□□□□ -1.56
UPK1BO75841 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
UPK1BO75841 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 RNA5SP382-201ENST00000363355 112 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 MIR181C-201ENST00000384881 110 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 AC090114.1-201ENST00000393266 448 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 PTCD2P2-201ENST00000415579 1095 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
UPK1BO75841 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC5.31□□□□□ -1.56
UPK1BO75841 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1BO75841 AC000362.1-201ENST00000433725 425 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.31□□□□□ -1.56
UPK1BO75841 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1BO75841 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1BO75841 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1BO75841 ATP5G1P6-201ENST00000451206 412 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 TCEAL4P1-201ENST00000453620 588 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 RN7SL587P-201ENST00000459853 281 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.31□□□□□ -1.56
UPK1BO75841 AC079080.1-201ENST00000479841 822 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 AC127024.1-201ENST00000490847 418 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1BO75841 AC078899.1-201ENST00000521432 1185 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1BO75841 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.31□□□□□ -1.56
UPK1BO75841 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1BO75841 BMS1P16-201ENST00000556075 1147 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 PPIAP6-201ENST00000557078 499 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 HMGN2P47-201ENST00000559378 272 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1BO75841 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1BO75841 AC092032.1-201ENST00000603090 165 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 RPL12P48-201ENST00000605620 304 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1BO75841 AL133481.2-203ENST00000607558 139 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.31□□□□□ -1.56
UPK1BO75841 AL162574.1-201ENST00000615702 950 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 AC006328.2-201ENST00000623198 397 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.31□□□□□ -1.56
UPK1BO75841 AC012005.2-201ENST00000624333 397 ntBASIC5.31□□□□□ -1.56
UPK1BO75841 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.31□□□□□ -1.56
UPK1BO75841 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.31□□□□□ -1.56
UPK1BO75841 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.31□□□□□ -1.56
UPK1BO75841 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPK1BO75841 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
UPK1BO75841 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 CST13P-201ENST00000376992 428 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 RPL11P3-201ENST00000395256 523 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 RPL7-203ENST00000396466 762 ntTSL 3 BASIC5.3□□□□□ -1.56
UPK1BO75841 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 RN7SKP279-201ENST00000411383 298 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1BO75841 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.3□□□□□ -1.56
UPK1BO75841 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.3□□□□□ -1.56
UPK1BO75841 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.3□□□□□ -1.56
UPK1BO75841 ELF5-203ENST00000429939 637 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 RPE-213ENST00000445268 668 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 AC022080.2-201ENST00000452932 533 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 RANP2-201ENST00000456833 229 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms