Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC138761.5-201ENST00000433967 325 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 RPL29P7-201ENST00000440227 457 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.28□□□□□ -1.4
SHOX2O60902 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.28□□□□□ -1.4
SHOX2O60902 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.28□□□□□ -1.4
SHOX2O60902 SNORA35.1-201ENST00000458908 128 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 AC018475.1-201ENST00000478358 465 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 RN7SL654P-201ENST00000479178 292 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 AC105420.1-201ENST00000504389 582 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.28□□□□□ -1.4
SHOX2O60902 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.28□□□□□ -1.4
SHOX2O60902 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.28□□□□□ -1.4
SHOX2O60902 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SHOX2O60902 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.28□□□□□ -1.4
SHOX2O60902 AC027796.1-201ENST00000575593 512 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.28□□□□□ -1.4
SHOX2O60902 AL022394.1-201ENST00000606979 292 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 AL031777.2-201ENST00000611953 196 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 SNORA11.6-201ENST00000619030 128 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 AC096708.4-201ENST00000620563 552 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 AC005618.4-201ENST00000625053 554 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 AL355480.1-201ENST00000629041 99 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 AC063952.1-203ENST00000634410 658 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 AC243725.1-201ENST00000637164 436 ntBASIC6.28□□□□□ -1.4
SHOX2O60902 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.28□□□□□ -1.4
SHOX2O60902 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHOX2O60902 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHOX2O60902 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHOX2O60902 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHOX2O60902 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.28□□□□□ -1.4
SHOX2O60902 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.28□□□□□ -1.4
SHOX2O60902 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SHOX2O60902 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SHOX2O60902 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
SHOX2O60902 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
SHOX2O60902 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.27□□□□□ -1.41
SHOX2O60902 AL158152.1-201ENST00000602652 1435 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 MIR431-201ENST00000385266 114 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SHOX2O60902 RPSAP44-201ENST00000406712 884 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 SNORA11B-201ENST00000408175 129 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC6.27□□□□□ -1.41
SHOX2O60902 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.27□□□□□ -1.41
SHOX2O60902 METTL15P3-201ENST00000415522 1221 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.27□□□□□ -1.41
SHOX2O60902 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.27□□□□□ -1.41
SHOX2O60902 PHBP4-201ENST00000437447 837 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 AL663074.2-201ENST00000440621 479 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 AC073072.2-201ENST00000447425 348 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.27□□□□□ -1.41
SHOX2O60902 NDUFB4P1-201ENST00000462398 381 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 AC026782.2-201ENST00000510845 636 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 AC097460.2-201ENST00000511857 741 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 IGLC4-201ENST00000517690 248 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 AC138832.1-201ENST00000522871 556 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 AC090616.1-201ENST00000583895 447 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.27□□□□□ -1.41
SHOX2O60902 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.27□□□□□ -1.41
SHOX2O60902 FRG2MP-201ENST00000613317 856 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 AC048341.3-201ENST00000619323 491 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 AC073488.9-201ENST00000631601 754 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 BX284613.1-201ENST00000452221 1641 ntBASIC6.27□□□□□ -1.41
SHOX2O60902 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.27□□□□□ -1.41
SHOX2O60902 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.27□□□□□ -1.41
SHOX2O60902 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.27□□□□□ -1.41
SHOX2O60902 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHOX2O60902 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 PSMC1P6-201ENST00000477233 1319 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHOX2O60902 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SHOX2O60902 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHOX2O60902 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHOX2O60902 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.26□□□□□ -1.41
SHOX2O60902 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHOX2O60902 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.26□□□□□ -1.41
SHOX2O60902 RNA5SP187-201ENST00000384400 119 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 FDPSP5-201ENST00000399474 1057 ntBASIC6.26□□□□□ -1.41
SHOX2O60902 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.26□□□□□ -1.41
SHOX2O60902 RNU2-18P-201ENST00000411224 162 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms