Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX4O60224 AL049634.1-201ENST00000453770 1720 ntBASIC5.93□□□□□ -1.46
SSX4O60224 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX4O60224 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX4O60224 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX4O60224 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX4O60224 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SSX4O60224 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSX4O60224 CDY19P-201ENST00000411668 1613 ntBASIC5.92□□□□□ -1.46
SSX4O60224 CDY18P-201ENST00000438294 1609 ntBASIC5.92□□□□□ -1.46
SSX4O60224 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 AL353763.1-201ENST00000624467 1628 ntBASIC5.92□□□□□ -1.46
SSX4O60224 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX4O60224 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX4O60224 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX4O60224 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSX4O60224 RNU4-23P-201ENST00000362839 140 ntBASIC5.92□□□□□ -1.46
SSX4O60224 AC116036.1-201ENST00000412199 367 ntBASIC5.92□□□□□ -1.46
SSX4O60224 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX4O60224 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX4O60224 AC245884.2-201ENST00000426257 404 ntBASIC5.92□□□□□ -1.46
SSX4O60224 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX4O60224 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX4O60224 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.92□□□□□ -1.46
SSX4O60224 AC092601.1-201ENST00000444526 383 ntBASIC5.92□□□□□ -1.46
SSX4O60224 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX4O60224 AL445991.1-201ENST00000450381 475 ntBASIC5.92□□□□□ -1.46
SSX4O60224 RN7SL393P-201ENST00000463588 296 ntBASIC5.92□□□□□ -1.46
SSX4O60224 RN7SL70P-201ENST00000478322 302 ntBASIC5.92□□□□□ -1.46
SSX4O60224 PPP1R2P6-201ENST00000478565 588 ntBASIC5.92□□□□□ -1.46
SSX4O60224 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 RPL23AP8-201ENST00000479812 475 ntBASIC5.92□□□□□ -1.46
SSX4O60224 AL117692.1-201ENST00000494283 713 ntBASIC5.92□□□□□ -1.46
SSX4O60224 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX4O60224 AC138517.1-201ENST00000515724 568 ntBASIC5.92□□□□□ -1.46
SSX4O60224 SNORA81.2-201ENST00000516868 170 ntBASIC5.92□□□□□ -1.46
SSX4O60224 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.92□□□□□ -1.46
SSX4O60224 AC084851.2-201ENST00000530377 364 ntBASIC5.92□□□□□ -1.46
SSX4O60224 AC025423.2-201ENST00000537570 439 ntBASIC5.92□□□□□ -1.46
SSX4O60224 AC078878.1-201ENST00000539832 958 ntBASIC5.92□□□□□ -1.46
SSX4O60224 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX4O60224 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX4O60224 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.92□□□□□ -1.46
SSX4O60224 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSX4O60224 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.92□□□□□ -1.46
SSX4O60224 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX4O60224 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX4O60224 MIR212-201ENST00000586026 110 ntBASIC5.92□□□□□ -1.46
SSX4O60224 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX4O60224 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX4O60224 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX4O60224 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX4O60224 RPS4XP21-201ENST00000603814 750 ntBASIC5.92□□□□□ -1.46
SSX4O60224 AC096586.2-201ENST00000610260 441 ntBASIC5.92□□□□□ -1.46
SSX4O60224 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.92□□□□□ -1.46
SSX4O60224 AC016911.1-201ENST00000613297 452 ntBASIC5.92□□□□□ -1.46
SSX4O60224 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSX4O60224 AL596275.2-207ENST00000641188 675 ntBASIC5.92□□□□□ -1.46
SSX4O60224 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SSX4O60224 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX4O60224 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX4O60224 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.92□□□□□ -1.46
SSX4O60224 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSX4O60224 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX4O60224 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 AC090220.1-201ENST00000593078 1699 ntBASIC5.91□□□□□ -1.46
SSX4O60224 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX4O60224 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.91□□□□□ -1.46
SSX4O60224 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SSX4O60224 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SSX4O60224 AC005725.1-201ENST00000577346 2607 ntBASIC5.91□□□□□ -1.46
SSX4O60224 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX4O60224 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 RNU6-1017P-201ENST00000363613 106 ntBASIC5.91□□□□□ -1.46
SSX4O60224 RN7SKP130-201ENST00000364924 301 ntBASIC5.91□□□□□ -1.46
SSX4O60224 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX4O60224 SNORA7A-201ENST00000384765 139 ntBASIC5.91□□□□□ -1.46
SSX4O60224 MIR621-201ENST00000384919 96 ntBASIC5.91□□□□□ -1.46
SSX4O60224 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSX4O60224 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.91□□□□□ -1.46
SSX4O60224 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX4O60224 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms