Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.05□□□□□ -1.6
UPK2O00526 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.05□□□□□ -1.6
UPK2O00526 AC005332.4-201ENST00000592752 579 ntBASIC5.05□□□□□ -1.6
UPK2O00526 AL078624.2-201ENST00000605063 554 ntBASIC5.05□□□□□ -1.6
UPK2O00526 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.05□□□□□ -1.6
UPK2O00526 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK2O00526 MIR6849-201ENST00000618543 69 ntBASIC5.05□□□□□ -1.6
UPK2O00526 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK2O00526 AC003992.1-201ENST00000635364 557 ntBASIC5.05□□□□□ -1.6
UPK2O00526 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK2O00526 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.05□□□□□ -1.6
UPK2O00526 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK2O00526 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK2O00526 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.05□□□□□ -1.6
UPK2O00526 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
UPK2O00526 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.04□□□□□ -1.6
UPK2O00526 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
UPK2O00526 AL591135.1-201ENST00000401578 5914 ntBASIC5.04□□□□□ -1.6
UPK2O00526 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK2O00526 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK2O00526 SNX18P3-202ENST00000565670 1750 ntBASIC5.04□□□□□ -1.6
UPK2O00526 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK2O00526 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.04□□□□□ -1.6
UPK2O00526 KYNUP2-201ENST00000582280 1329 ntBASIC5.04□□□□□ -1.6
UPK2O00526 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.04□□□□□ -1.6
UPK2O00526 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
UPK2O00526 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK2O00526 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
UPK2O00526 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
UPK2O00526 AP001541.1-201ENST00000623322 1904 ntBASIC5.04□□□□□ -1.6
UPK2O00526 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK2O00526 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK2O00526 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK2O00526 AC092634.1-201ENST00000366505 199 ntBASIC5.04□□□□□ -1.6
UPK2O00526 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
UPK2O00526 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPK2O00526 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK2O00526 RPL23AP17-201ENST00000401064 499 ntBASIC5.04□□□□□ -1.6
UPK2O00526 OR52N3P-201ENST00000413417 934 ntBASIC5.04□□□□□ -1.6
UPK2O00526 AP003385.1-201ENST00000426387 893 ntBASIC5.04□□□□□ -1.6
UPK2O00526 MORF4-201ENST00000447135 971 ntBASIC5.04□□□□□ -1.6
UPK2O00526 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK2O00526 RPL5P33-201ENST00000487833 905 ntBASIC5.04□□□□□ -1.6
UPK2O00526 AC009567.2-201ENST00000502989 349 ntBASIC5.04□□□□□ -1.6
UPK2O00526 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.04□□□□□ -1.6
UPK2O00526 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.04□□□□□ -1.6
UPK2O00526 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
UPK2O00526 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.04□□□□□ -1.6
UPK2O00526 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.04□□□□□ -1.6
UPK2O00526 IGHV4-55-201ENST00000520889 368 ntBASIC5.04□□□□□ -1.6
UPK2O00526 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.04□□□□□ -1.6
UPK2O00526 RPA2P3-201ENST00000533268 770 ntBASIC5.04□□□□□ -1.6
UPK2O00526 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK2O00526 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK2O00526 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK2O00526 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.04□□□□□ -1.6
UPK2O00526 DPPA3P2-202ENST00000557188 1219 ntBASIC5.04□□□□□ -1.6
UPK2O00526 RN7SL657P-201ENST00000582431 293 ntBASIC5.04□□□□□ -1.6
UPK2O00526 RN7SL475P-201ENST00000583379 298 ntBASIC5.04□□□□□ -1.6
UPK2O00526 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK2O00526 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK2O00526 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
UPK2O00526 AC034229.2-201ENST00000566945 2508 ntBASIC5.04□□□□□ -1.6
UPK2O00526 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
UPK2O00526 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
UPK2O00526 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
UPK2O00526 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK2O00526 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.04□□□□□ -1.6
UPK2O00526 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.04□□□□□ -1.6
UPK2O00526 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK2O00526 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK2O00526 NR1H5P-201ENST00000452683 1377 ntBASIC5.04□□□□□ -1.6
UPK2O00526 HDAC1P2-201ENST00000453661 1398 ntBASIC5.04□□□□□ -1.6
UPK2O00526 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPK2O00526 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.03□□□□□ -1.6
UPK2O00526 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.03□□□□□ -1.6
UPK2O00526 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
UPK2O00526 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPK2O00526 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPK2O00526 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPK2O00526 AL136984.1-201ENST00000607611 1893 ntBASIC5.03□□□□□ -1.6
UPK2O00526 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPK2O00526 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
UPK2O00526 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
UPK2O00526 RNU1-59P-201ENST00000364829 162 ntBASIC5.03□□□□□ -1.6
UPK2O00526 AL121835.1-201ENST00000404250 354 ntBASIC5.03□□□□□ -1.6
UPK2O00526 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK2O00526 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.03□□□□□ -1.6
UPK2O00526 ELOBP4-201ENST00000423418 296 ntBASIC5.03□□□□□ -1.6
UPK2O00526 AC016027.5-201ENST00000427227 210 ntBASIC5.03□□□□□ -1.6
UPK2O00526 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK2O00526 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.03□□□□□ -1.6
UPK2O00526 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.03□□□□□ -1.6
UPK2O00526 AL645939.3-201ENST00000435408 225 ntBASIC5.03□□□□□ -1.6
UPK2O00526 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPK2O00526 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.03□□□□□ -1.6
UPK2O00526 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPK2O00526 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.03□□□□□ -1.6
UPK2O00526 RANP2-201ENST00000456833 229 ntBASIC5.03□□□□□ -1.6
UPK2O00526 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms