Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC003045.1-201ENST00000398779 713 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 RN7SKP151-201ENST00000410230 316 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 RN7SKP129-201ENST00000410288 299 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 UBTFL2-201ENST00000411859 1191 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC002127.1-201ENST00000421305 225 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC234771.4-201ENST00000441416 730 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 COX4I1P2-201ENST00000447446 547 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AL445687.2-201ENST00000458156 728 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 IGHV4-55-201ENST00000520889 368 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC131935.1-201ENST00000524621 333 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC084851.2-201ENST00000530377 364 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 RPL41P2-201ENST00000544920 409 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 DPPA3P2-201ENST00000553589 478 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC027796.1-201ENST00000575593 512 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC024267.2-201ENST00000582737 417 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC027334.1-201ENST00000603257 310 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AL591222.2-201ENST00000604443 754 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 MIR6070-201ENST00000613967 103 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC007204.1-201ENST00000621794 555 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC091059.2-201ENST00000623355 614 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC068213.1-201ENST00000625124 226 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 OR7A1P-202ENST00000641542 1158 ntBASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAV27A0A087WT01 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 EIF3EP2-201ENST00000423042 1814 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC097634.1-201ENST00000604491 2467 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 SNORA43.1-201ENST00000364863 140 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 RNA5SP85-201ENST00000365378 119 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 SNORA70.9-201ENST00000384370 135 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC015977.1-201ENST00000418887 292 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 RPS7P14-201ENST00000426405 583 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC016027.5-201ENST00000427227 210 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 MORF4-201ENST00000447135 971 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 RN7SL643P-201ENST00000471845 291 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC015524.1-201ENST00000491585 472 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 GM2AP2-201ENST00000491764 562 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC139713.1-202ENST00000512366 460 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 OR4A6P-201ENST00000534364 970 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms