Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.69■□□□□ 0.58
COL21A1Q96P44 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL21A1Q96P44 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 BX119927.1-201ENST00000636596 1552 ntBASIC18.68■□□□□ 0.58
COL21A1Q96P44 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.68■□□□□ 0.58
COL21A1Q96P44 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
COL21A1Q96P44 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL21A1Q96P44 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL21A1Q96P44 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL21A1Q96P44 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL21A1Q96P44 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL21A1Q96P44 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 DUSP5P2-201ENST00000426873 1033 ntBASIC18.67■□□□□ 0.58
COL21A1Q96P44 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 AC133041.1-202ENST00000642053 222 ntBASIC18.67■□□□□ 0.58
COL21A1Q96P44 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL21A1Q96P44 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL21A1Q96P44 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL21A1Q96P44 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
COL21A1Q96P44 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL21A1Q96P44 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL21A1Q96P44 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL21A1Q96P44 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL21A1Q96P44 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL21A1Q96P44 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.66■□□□□ 0.58
COL21A1Q96P44 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL21A1Q96P44 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.66■□□□□ 0.58
COL21A1Q96P44 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL21A1Q96P44 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL21A1Q96P44 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL21A1Q96P44 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL21A1Q96P44 AC073210.2-201ENST00000430369 194 ntBASIC18.66■□□□□ 0.58
COL21A1Q96P44 AC069152.1-201ENST00000438030 544 ntBASIC18.66■□□□□ 0.58
COL21A1Q96P44 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL21A1Q96P44 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.66■□□□□ 0.58
COL21A1Q96P44 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.66■□□□□ 0.58
COL21A1Q96P44 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.66■□□□□ 0.58
COL21A1Q96P44 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.66■□□□□ 0.58
COL21A1Q96P44 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.66■□□□□ 0.58
COL21A1Q96P44 AC125437.2-201ENST00000625180 2167 ntBASIC18.66■□□□□ 0.58
COL21A1Q96P44 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL21A1Q96P44 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
COL21A1Q96P44 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
COL21A1Q96P44 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL21A1Q96P44 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL21A1Q96P44 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL21A1Q96P44 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL21A1Q96P44 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL21A1Q96P44 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.65■□□□□ 0.58
COL21A1Q96P44 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.65■□□□□ 0.58
COL21A1Q96P44 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL21A1Q96P44 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms