Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21■□□□□ 0.95
SSR1P43307 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21■□□□□ 0.95
SSR1P43307 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21■□□□□ 0.95
SSR1P43307 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21■□□□□ 0.95
SSR1P43307 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.99■□□□□ 0.95
SSR1P43307 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.99■□□□□ 0.95
SSR1P43307 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.99■□□□□ 0.95
SSR1P43307 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.99■□□□□ 0.95
SSR1P43307 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.99■□□□□ 0.95
SSR1P43307 OR10C1-204ENST00000622521 1039 ntBASIC20.99■□□□□ 0.95
SSR1P43307 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.99■□□□□ 0.95
SSR1P43307 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.99■□□□□ 0.95
SSR1P43307 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR1P43307 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.98■□□□□ 0.95
SSR1P43307 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.98■□□□□ 0.95
SSR1P43307 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
SSR1P43307 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SSR1P43307 AC093787.1-201ENST00000450396 207 ntBASIC20.98■□□□□ 0.95
SSR1P43307 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
SSR1P43307 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.98■□□□□ 0.95
SSR1P43307 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.98■□□□□ 0.95
SSR1P43307 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.98■□□□□ 0.95
SSR1P43307 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.98■□□□□ 0.95
SSR1P43307 AL137784.2-201ENST00000607332 1000 ntBASIC20.98■□□□□ 0.95
SSR1P43307 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SSR1P43307 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SSR1P43307 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR1P43307 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SSR1P43307 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SSR1P43307 AC010980.2-201ENST00000587099 1412 ntBASIC20.97■□□□□ 0.95
SSR1P43307 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.97■□□□□ 0.95
SSR1P43307 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SSR1P43307 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SSR1P43307 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
SSR1P43307 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.97■□□□□ 0.95
SSR1P43307 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.97■□□□□ 0.95
SSR1P43307 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 AC007952.6-201ENST00000573168 2673 ntBASIC20.97■□□□□ 0.95
SSR1P43307 AC003957.1-201ENST00000625108 2673 ntBASIC20.97■□□□□ 0.95
SSR1P43307 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SSR1P43307 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR1P43307 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR1P43307 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR1P43307 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SSR1P43307 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR1P43307 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SSR1P43307 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR1P43307 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.96■□□□□ 0.95
SSR1P43307 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms