Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.73■■□□□ 1.23
ATP2A1O14983 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.73■■□□□ 1.23
ATP2A1O14983 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.73■■□□□ 1.23
ATP2A1O14983 CR392000.1-201ENST00000624770 1228 ntBASIC22.73■■□□□ 1.23
ATP2A1O14983 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ATP2A1O14983 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP2A1O14983 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
ATP2A1O14983 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ATP2A1O14983 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP2A1O14983 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP2A1O14983 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP2A1O14983 AC018553.1-201ENST00000616682 1458 ntBASIC22.73■■□□□ 1.23
ATP2A1O14983 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.72■■□□□ 1.23
ATP2A1O14983 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.72■■□□□ 1.23
ATP2A1O14983 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ATP2A1O14983 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
ATP2A1O14983 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
ATP2A1O14983 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.72■■□□□ 1.23
ATP2A1O14983 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP2A1O14983 RCN1P1-201ENST00000400413 996 ntBASIC22.72■■□□□ 1.23
ATP2A1O14983 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.72■■□□□ 1.23
ATP2A1O14983 KRT18P16-201ENST00000510337 1294 ntBASIC22.72■■□□□ 1.23
ATP2A1O14983 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.72■■□□□ 1.23
ATP2A1O14983 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.72■■□□□ 1.23
ATP2A1O14983 AL445675.2-201ENST00000620291 557 ntBASIC22.72■■□□□ 1.23
ATP2A1O14983 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ATP2A1O14983 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP2A1O14983 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.72■■□□□ 1.23
ATP2A1O14983 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
ATP2A1O14983 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.72■■□□□ 1.23
ATP2A1O14983 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP2A1O14983 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
ATP2A1O14983 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.71■■□□□ 1.23
ATP2A1O14983 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.71■■□□□ 1.23
ATP2A1O14983 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.71■■□□□ 1.23
ATP2A1O14983 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP2A1O14983 MIR1224-201ENST00000408193 85 ntBASIC22.71■■□□□ 1.23
ATP2A1O14983 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.71■■□□□ 1.23
ATP2A1O14983 KRT18P21-201ENST00000515767 1272 ntBASIC22.71■■□□□ 1.23
ATP2A1O14983 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.71■■□□□ 1.23
ATP2A1O14983 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.71■■□□□ 1.23
ATP2A1O14983 AC145285.6-201ENST00000604632 637 ntBASIC22.71■■□□□ 1.23
ATP2A1O14983 AP000525.1-201ENST00000608286 694 ntBASIC22.71■■□□□ 1.23
ATP2A1O14983 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.71■■□□□ 1.23
ATP2A1O14983 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.71■■□□□ 1.23
ATP2A1O14983 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP2A1O14983 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP2A1O14983 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP2A1O14983 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP2A1O14983 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
ATP2A1O14983 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
ATP2A1O14983 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ATP2A1O14983 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP2A1O14983 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP2A1O14983 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP2A1O14983 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ATP2A1O14983 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
ATP2A1O14983 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.7■■□□□ 1.22
ATP2A1O14983 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.7■■□□□ 1.22
ATP2A1O14983 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP2A1O14983 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP2A1O14983 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP2A1O14983 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATP2A1O14983 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
ATP2A1O14983 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.7■■□□□ 1.22
ATP2A1O14983 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ATP2A1O14983 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.69■■□□□ 1.22
ATP2A1O14983 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
ATP2A1O14983 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.69■■□□□ 1.22
ATP2A1O14983 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
ATP2A1O14983 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.69■■□□□ 1.22
ATP2A1O14983 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ATP2A1O14983 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.69■■□□□ 1.22
ATP2A1O14983 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
ATP2A1O14983 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
ATP2A1O14983 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.69■■□□□ 1.22
ATP2A1O14983 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.69■■□□□ 1.22
ATP2A1O14983 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.69■■□□□ 1.22
ATP2A1O14983 FITM1-202ENST00000559294 800 ntBASIC22.69■■□□□ 1.22
ATP2A1O14983 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.69■■□□□ 1.22
ATP2A1O14983 AC026271.3-201ENST00000571884 352 ntBASIC22.69■■□□□ 1.22
ATP2A1O14983 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ATP2A1O14983 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ATP2A1O14983 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
ATP2A1O14983 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.68■■□□□ 1.22
ATP2A1O14983 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATP2A1O14983 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.68■■□□□ 1.22
ATP2A1O14983 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATP2A1O14983 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATP2A1O14983 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ATP2A1O14983 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.68■■□□□ 1.22
ATP2A1O14983 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.68■■□□□ 1.22
ATP2A1O14983 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATP2A1O14983 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATP2A1O14983 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.68■■□□□ 1.22
ATP2A1O14983 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.68■■□□□ 1.22
ATP2A1O14983 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.68■■□□□ 1.22
ATP2A1O14983 AC010331.1-201ENST00000611423 582 ntBASIC22.68■■□□□ 1.22
ATP2A1O14983 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.68■■□□□ 1.22
ATP2A1O14983 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms