Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-1A0A0G2JGB9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-1A0A0G2JGB9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-1A0A0G2JGB9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trdv2-1A0A0G2JGB9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trdv2-1A0A0G2JGB9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trdv2-1A0A0G2JGB9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trdv2-1A0A0G2JGB9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trdv2-1A0A0G2JGB9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Smad6-203ENSMUST00000179458 273 ntBASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.55□□□□□ -0.4
Trdv2-1A0A0G2JGB9 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms