Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Gm43173-201ENSMUST00000202246 593 ntBASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16d-dv11A0A075B617 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav16d-dv11A0A075B617 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav16d-dv11A0A075B617 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav16d-dv11A0A075B617 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav16d-dv11A0A075B617 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trav16d-dv11A0A075B617 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Mir8112-201ENSMUST00000184382 131 ntBASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm40848-201ENSMUST00000221998 324 ntBASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav16d-dv11A0A075B617 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav16d-dv11A0A075B617 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms