Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 PPIAP24-201ENST00000328558 471 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AL136100.1-201ENST00000407696 330 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 ELOBP4-201ENST00000423418 296 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 MARK2P8-201ENST00000476069 952 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC012123.2-201ENST00000485809 248 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 RPL19P11-201ENST00000495944 589 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 IGKV1D-32-201ENST00000517449 318 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 NPM1P5-201ENST00000557228 838 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC126323.4-201ENST00000566935 234 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AL031429.2-201ENST00000602605 649 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC022726.2-201ENST00000634673 547 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AC126474.2-201ENST00000623268 1750 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 AL442128.2-201ENST00000620246 1824 ntBASIC5.69□□□□□ -1.5
COPS3Q9UNS2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC092724.1-201ENST00000624623 3397 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 RNA5SP355-201ENST00000365317 135 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 UBE2V1P14-201ENST00000415815 558 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 DPPA2P2-201ENST00000418220 897 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 CHCHD4P5-201ENST00000436684 427 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC239800.1-201ENST00000442049 719 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AL022237.1-201ENST00000446663 358 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 UBBP5-201ENST00000446970 266 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AL121578.2-201ENST00000448797 447 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC114982.2-201ENST00000461396 358 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 RN7SL221P-201ENST00000466190 281 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 IGKV1D-22-201ENST00000518953 324 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AP001994.1-201ENST00000527539 826 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.68□□□□□ -1.5
COPS3Q9UNS2 MIR4312-201ENST00000579909 76 ntBASIC5.68□□□□□ -1.5
COPS3Q9UNS2 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 759.6 ms