Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 RNA5SP152-201ENST00000365184 110 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 MIR138-2-201ENST00000384916 84 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 SEPT7P2-202ENST00000398921 823 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AL096800.1-201ENST00000405326 893 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 RN7SKP17-201ENST00000411242 351 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 UBE2V1P14-201ENST00000415815 558 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC009303.1-201ENST00000426307 352 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC016027.5-201ENST00000427227 210 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 RPL12P16-201ENST00000431098 498 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC003989.1-201ENST00000434569 565 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 GAPDHP20-201ENST00000444107 1007 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC009244.1-201ENST00000450566 258 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AL133480.2-201ENST00000456723 487 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 RN7SL221P-201ENST00000466190 281 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC010442.1-201ENST00000515583 816 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC008429.4-201ENST00000521201 182 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC130366.1-201ENST00000526505 1192 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 OR7E19P-202ENST00000589942 844 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AL078624.2-201ENST00000605063 554 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC116165.3-201ENST00000614524 400 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 AC018692.2-201ENST00000624130 348 ntBASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCNB1IP1Q9NPC3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 AL592429.1-201ENST00000403909 1473 ntBASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNB1IP1Q9NPC3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 WDR95P-201ENST00000425638 1542 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC092701.1-201ENST00000623627 1551 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 RN7SKP130-201ENST00000364924 301 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 UBBP1-201ENST00000392399 473 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 SETP9-201ENST00000423837 832 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 RPL7AP71-201ENST00000451120 739 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC093815.1-201ENST00000508637 280 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 SLC25A51P2-201ENST00000535708 889 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AL162632.2-201ENST00000553933 399 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC091304.4-201ENST00000565703 620 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AL049840.5-201ENST00000602827 552 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AP001264.1-201ENST00000620602 703 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC069234.4-201ENST00000621276 412 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC022726.2-201ENST00000634673 547 ntBASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CCNB1IP1Q9NPC3 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms