Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMG20AQ9NP66 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
HMG20AQ9NP66 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMG20AQ9NP66 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.73□□□□□ -1.49
HMG20AQ9NP66 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.73□□□□□ -1.49
HMG20AQ9NP66 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.73□□□□□ -1.49
HMG20AQ9NP66 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.73□□□□□ -1.49
HMG20AQ9NP66 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HMG20AQ9NP66 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HMG20AQ9NP66 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AC027279.4-201ENST00000624371 2072 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 SNORA5.1-201ENST00000384275 131 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 SNORA11D-201ENST00000408548 128 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 SNORA11E-201ENST00000408778 128 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 RN7SKP137-201ENST00000411074 307 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 UBE2V1P14-201ENST00000415815 558 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AL158827.1-201ENST00000416300 391 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 GAPDHP57-201ENST00000424400 585 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 OR7E7P-201ENST00000455678 1012 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 RN7SL456P-201ENST00000469290 295 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 RN7SL216P-201ENST00000471607 298 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AC025271.1-201ENST00000485045 429 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AC010409.2-201ENST00000505780 478 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 SNX18P23-201ENST00000510867 677 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 MTCYBP44-201ENST00000514835 823 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 NF1P12-201ENST00000549593 583 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 MIR6731-201ENST00000614863 72 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 SNORA16A-202ENST00000628458 135 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 AC125238.2-201ENST00000430003 1440 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.72□□□□□ -1.49
HMG20AQ9NP66 UGT2B24P-201ENST00000514441 1597 ntBASIC5.72□□□□□ -1.49
HMG20AQ9NP66 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
HMG20AQ9NP66 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMG20AQ9NP66 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HMG20AQ9NP66 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMG20AQ9NP66 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
HMG20AQ9NP66 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 MIR301B-201ENST00000390813 78 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 RNU1-56P-201ENST00000391303 164 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC009362.1-201ENST00000427253 406 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 PAICSP2-201ENST00000429118 1150 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 NPM1P25-201ENST00000429734 854 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC114402.2-201ENST00000432760 643 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 CBX5P1-201ENST00000468470 561 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC017007.1-201ENST00000511960 415 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 OR8Q1P-201ENST00000526467 655 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AL121579.2-201ENST00000555466 590 ntBASIC5.71□□□□□ -1.5
HMG20AQ9NP66 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.71□□□□□ -1.5
HMG20AQ9NP66 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms