Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 FRG1BP-201ENST00000278882 761 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 FRG1CP-201ENST00000358464 769 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 RNU4-79P-201ENST00000362764 141 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 RNU6-534P-201ENST00000364877 106 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 TRAV35-201ENST00000390462 330 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC003080.1-201ENST00000413552 767 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC009237.2-201ENST00000421358 284 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 RHEBP1-201ENST00000448647 556 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 FTH1P27-201ENST00000449509 551 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC108463.1-201ENST00000450258 347 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 RPSAP54-201ENST00000454001 886 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 RN7SL333P-201ENST00000476398 297 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 RPS4XP15-201ENST00000489210 795 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 HNRNPA1P44-201ENST00000503999 879 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 IGHVII-26-2-201ENST00000518751 325 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 IGKV3-34-201ENST00000521692 293 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 MIR3680-2-201ENST00000578247 87 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC015917.1-201ENST00000579654 510 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 MIR3680-1-201ENST00000581433 87 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 MIR548AB-201ENST00000584917 84 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AP001542.2-201ENST00000593141 364 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC005021.1-201ENST00000608730 355 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC040896.1-201ENST00000613819 479 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC087742.2-201ENST00000616113 740 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC120349.2-201ENST00000625002 298 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AL136967.1-201ENST00000625120 441 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 MIR6863-201ENST00000636112 90 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 IL24-202ENST00000367093 1819 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 NAP1L4P1-201ENST00000319092 1157 ntBASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 Y_RNA.89-201ENST00000363031 102 ntBASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 GPN2-201ENST00000374133 715 ntTSL 3 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 RNA5SP256-201ENST00000390978 113 ntBASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 GLRX3P2-201ENST00000405027 1038 ntBASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 AL356776.1-201ENST00000406574 447 ntBASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 RNA5SP80-201ENST00000410475 111 ntBASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 AL121878.1-201ENST00000418638 859 ntBASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 RPL4P4-201ENST00000422486 1284 ntBASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 AL512649.1-201ENST00000428997 581 ntBASIC8.63□□□□□ -1.03
SCUBE3Q8IX30 CTBP2P1-201ENST00000431853 245 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms