Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AL161742.1-201ENST00000418154 584 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AC009506.2-201ENST00000420635 840 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 CYCSP52-201ENST00000422857 310 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 CHCHD4P5-201ENST00000436684 427 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AC022415.1-202ENST00000486612 523 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 PFN2-213ENST00000494827 793 ntTSL 4 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 RPL7L1P7-201ENST00000509986 724 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 SETP17-201ENST00000534163 817 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AL162632.2-201ENST00000553933 399 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AC010287.1-201ENST00000566916 357 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 FCGR1CP-201ENST00000579737 1127 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AC127071.2-201ENST00000623293 527 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AC018692.2-201ENST00000624130 348 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AL132640.3-201ENST00000630473 177 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 AC105749.1-201ENST00000631338 2008 ntBASIC4.92□□□□□ -1.62
HIST1H1AQ02539 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HIST1H1AQ02539 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC092701.1-201ENST00000623627 1551 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 POT1-202ENST00000393329 3950 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 MIR133A2-201ENST00000347538 102 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 RNA5SP152-201ENST00000365184 110 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 RNA5SP355-201ENST00000365317 135 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AL451061.1-201ENST00000407887 862 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AL929472.1-201ENST00000417484 429 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 YWHAZP5-201ENST00000419975 730 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 RPL3P11-201ENST00000434028 1146 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AL592114.2-201ENST00000440142 532 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 RPS10P14-201ENST00000440748 502 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 CYCSP51-201ENST00000443545 318 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC105391.1-201ENST00000503155 1045 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC091965.3-201ENST00000506236 208 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 SNORA70.11-201ENST00000515987 138 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 SNORA70.13-201ENST00000516116 138 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC008429.2-201ENST00000523057 864 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 RBMS2P1-201ENST00000525031 1226 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 RN7SL426P-201ENST00000579106 295 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AP001267.4-201ENST00000602598 545 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC114546.4-201ENST00000624413 369 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AL035425.4-201ENST00000624509 1063 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC015689.2-201ENST00000528172 1738 ntBASIC4.91□□□□□ -1.62
HIST1H1AQ02539 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HIST1H1AQ02539 AC016745.2-201ENST00000608834 3443 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms