Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC090971.3-201ENST00000557871 1041 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.52□□□□□ -1.69
CKS1BP61024 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC4.52□□□□□ -1.69
CKS1BP61024 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 BMS1P8-201ENST00000565049 1178 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.52□□□□□ -1.69
CKS1BP61024 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC4.52□□□□□ -1.69
CKS1BP61024 AC027216.1-201ENST00000577726 685 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 RN7SL697P-201ENST00000582484 299 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 AC020914.7-201ENST00000594477 545 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AL078623.1-201ENST00000602702 907 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AL136139.1-201ENST00000605568 222 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AC004908.1-201ENST00000606572 541 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC4.52□□□□□ -1.69
CKS1BP61024 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC4.52□□□□□ -1.69
CKS1BP61024 AL138693.1-201ENST00000622219 129 ntBASIC4.52□□□□□ -1.69
CKS1BP61024 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC4.52□□□□□ -1.69
CKS1BP61024 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC4.52□□□□□ -1.69
CKS1BP61024 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
CKS1BP61024 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC4.52□□□□□ -1.69
CKS1BP61024 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.52□□□□□ -1.69
CKS1BP61024 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CKS1BP61024 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CKS1BP61024 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC4.51□□□□□ -1.69
CKS1BP61024 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 GUCY1B2-204ENST00000531898 1979 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CKS1BP61024 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CKS1BP61024 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CKS1BP61024 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CKS1BP61024 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CKS1BP61024 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CKS1BP61024 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CKS1BP61024 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CKS1BP61024 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CKS1BP61024 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CKS1BP61024 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CKS1BP61024 RNU4-44P-201ENST00000363050 141 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 SNORD8-201ENST00000363915 110 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 RNA5SP442-201ENST00000365050 107 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CKS1BP61024 VDAC2P1-201ENST00000399358 958 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 RPL23AP17-201ENST00000401064 499 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC4.51□□□□□ -1.69
CKS1BP61024 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 AC009237.9-201ENST00000414800 347 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 RPSAP59-201ENST00000421048 890 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 GAPDHP57-201ENST00000424400 585 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC4.51□□□□□ -1.69
CKS1BP61024 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC4.51□□□□□ -1.69
CKS1BP61024 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 PRPS1P2-201ENST00000430496 937 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC4.51□□□□□ -1.69
CKS1BP61024 RPL21P33-201ENST00000444831 484 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC4.51□□□□□ -1.69
CKS1BP61024 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 AC002553.2-201ENST00000453217 340 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 RN7SL228P-201ENST00000470060 303 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 RN7SL379P-201ENST00000479912 293 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 RN7SL647P-201ENST00000485429 300 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CKS1BP61024 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC4.51□□□□□ -1.69
CKS1BP61024 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC4.51□□□□□ -1.69
CKS1BP61024 IGLC4-201ENST00000517690 248 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 AC100854.1-201ENST00000520351 341 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC4.51□□□□□ -1.69
CKS1BP61024 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC4.51□□□□□ -1.69
CKS1BP61024 OR4A13P-201ENST00000529316 942 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC4.51□□□□□ -1.69
CKS1BP61024 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC4.51□□□□□ -1.69
CKS1BP61024 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.51□□□□□ -1.69
CKS1BP61024 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 RN7SL270P-201ENST00000579643 281 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 COX6CP16-201ENST00000603667 216 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 AC005070.1-201ENST00000603744 365 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 AC073575.2-201ENST00000614212 627 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 AC004241.2-201ENST00000614562 444 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 AC015660.5-201ENST00000623238 564 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 AC087893.2-201ENST00000623272 255 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC4.51□□□□□ -1.69
CKS1BP61024 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 AP002800.1-201ENST00000624982 2225 ntBASIC4.51□□□□□ -1.69
CKS1BP61024 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.51□□□□□ -1.69
CKS1BP61024 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CKS1BP61024 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
CKS1BP61024 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms