Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.67□□□□□ -1.5
SRP9P49458 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.67□□□□□ -1.5
SRP9P49458 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.67□□□□□ -1.5
SRP9P49458 AC026782.2-201ENST00000510845 636 ntBASIC5.67□□□□□ -1.5
SRP9P49458 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.67□□□□□ -1.5
SRP9P49458 IGHV1-14-201ENST00000523391 241 ntBASIC5.67□□□□□ -1.5
SRP9P49458 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.67□□□□□ -1.5
SRP9P49458 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.67□□□□□ -1.5
SRP9P49458 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.67□□□□□ -1.5
SRP9P49458 AC027796.1-201ENST00000575593 512 ntBASIC5.67□□□□□ -1.5
SRP9P49458 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.67□□□□□ -1.5
SRP9P49458 AC036176.3-201ENST00000602456 418 ntBASIC5.67□□□□□ -1.5
SRP9P49458 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.67□□□□□ -1.5
SRP9P49458 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 CLUHP10-201ENST00000631979 980 ntBASIC5.67□□□□□ -1.5
SRP9P49458 AC027559.1-201ENST00000636288 271 ntBASIC5.67□□□□□ -1.5
SRP9P49458 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.67□□□□□ -1.5
SRP9P49458 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SRP9P49458 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SRP9P49458 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 AC010624.4-201ENST00000597606 1351 ntBASIC5.67□□□□□ -1.5
SRP9P49458 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.67□□□□□ -1.5
SRP9P49458 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.67□□□□□ -1.5
SRP9P49458 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.66□□□□□ -1.5
SRP9P49458 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SRP9P49458 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.66□□□□□ -1.5
SRP9P49458 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SRP9P49458 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SRP9P49458 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SRP9P49458 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.66□□□□□ -1.5
SRP9P49458 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SRP9P49458 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SRP9P49458 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
SRP9P49458 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.66□□□□□ -1.5
SRP9P49458 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SRP9P49458 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SRP9P49458 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SRP9P49458 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SRP9P49458 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SRP9P49458 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SRP9P49458 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.66□□□□□ -1.5
SRP9P49458 RNU1-59P-201ENST00000364829 162 ntBASIC5.66□□□□□ -1.5
SRP9P49458 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.66□□□□□ -1.5
SRP9P49458 AL050335.1-201ENST00000396909 869 ntBASIC5.66□□□□□ -1.5
SRP9P49458 FDPSP5-201ENST00000399474 1057 ntBASIC5.66□□□□□ -1.5
SRP9P49458 AL353133.1-201ENST00000407695 401 ntBASIC5.66□□□□□ -1.5
SRP9P49458 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SRP9P49458 CDC42P6-201ENST00000421246 576 ntBASIC5.66□□□□□ -1.5
SRP9P49458 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.66□□□□□ -1.5
SRP9P49458 PSMD8P1-201ENST00000436275 769 ntBASIC5.66□□□□□ -1.5
SRP9P49458 NPM1P23-201ENST00000440193 849 ntBASIC5.66□□□□□ -1.5
SRP9P49458 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.66□□□□□ -1.5
SRP9P49458 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.66□□□□□ -1.5
SRP9P49458 WDR82P2-201ENST00000444540 928 ntBASIC5.66□□□□□ -1.5
SRP9P49458 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SRP9P49458 UBBP5-201ENST00000446970 266 ntBASIC5.66□□□□□ -1.5
SRP9P49458 PPIAP32-201ENST00000449940 472 ntBASIC5.66□□□□□ -1.5
SRP9P49458 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.66□□□□□ -1.5
SRP9P49458 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.66□□□□□ -1.5
SRP9P49458 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.66□□□□□ -1.5
SRP9P49458 RN7SL502P-201ENST00000481857 290 ntBASIC5.66□□□□□ -1.5
SRP9P49458 RPS7P11-201ENST00000484240 586 ntBASIC5.66□□□□□ -1.5
SRP9P49458 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.66□□□□□ -1.5
SRP9P49458 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.66□□□□□ -1.5
SRP9P49458 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.66□□□□□ -1.5
SRP9P49458 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.66□□□□□ -1.5
SRP9P49458 AC113191.1-201ENST00000517759 403 ntBASIC5.66□□□□□ -1.5
SRP9P49458 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.66□□□□□ -1.5
SRP9P49458 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.66□□□□□ -1.5
SRP9P49458 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.66□□□□□ -1.5
SRP9P49458 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.66□□□□□ -1.5
SRP9P49458 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.66□□□□□ -1.5
SRP9P49458 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.66□□□□□ -1.5
SRP9P49458 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.66□□□□□ -1.5
SRP9P49458 AL049840.5-201ENST00000602827 552 ntBASIC5.66□□□□□ -1.5
SRP9P49458 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.66□□□□□ -1.5
SRP9P49458 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.66□□□□□ -1.5
SRP9P49458 AC093635.1-201ENST00000609028 555 ntBASIC5.66□□□□□ -1.5
SRP9P49458 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.66□□□□□ -1.5
SRP9P49458 U1.25-201ENST00000614085 162 ntBASIC5.66□□□□□ -1.5
SRP9P49458 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.66□□□□□ -1.5
SRP9P49458 U1.34-201ENST00000618578 162 ntBASIC5.66□□□□□ -1.5
SRP9P49458 U1.31-201ENST00000620022 160 ntBASIC5.66□□□□□ -1.5
SRP9P49458 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.66□□□□□ -1.5
SRP9P49458 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.66□□□□□ -1.5
SRP9P49458 AC092724.1-201ENST00000624623 3397 ntBASIC5.66□□□□□ -1.5
SRP9P49458 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC5.66□□□□□ -1.5
SRP9P49458 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SRP9P49458 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.66□□□□□ -1.5
SRP9P49458 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SRP9P49458 AC087516.1-201ENST00000561236 2428 ntBASIC5.66□□□□□ -1.5
SRP9P49458 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SRP9P49458 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SRP9P49458 ZNF101P1-201ENST00000435701 1720 ntBASIC5.65□□□□□ -1.5
SRP9P49458 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SRP9P49458 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.65□□□□□ -1.5
SRP9P49458 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms