Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC8.3□□□□□ -1.08
ERCC3P19447 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC8.3□□□□□ -1.08
ERCC3P19447 OR8G3P-202ENST00000641572 1255 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 AC008691.1-209ENST00000642094 814 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 MRPS17P1-201ENST00000596009 3130 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.3□□□□□ -1.08
ERCC3P19447 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
ERCC3P19447 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.3□□□□□ -1.08
ERCC3P19447 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.3□□□□□ -1.08
ERCC3P19447 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.3□□□□□ -1.08
ERCC3P19447 AL669831.5-218ENST00000591702 1873 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
ERCC3P19447 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC8.3□□□□□ -1.08
ERCC3P19447 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.29□□□□□ -1.08
ERCC3P19447 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC8.29□□□□□ -1.08
ERCC3P19447 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC8.29□□□□□ -1.08
ERCC3P19447 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.29□□□□□ -1.08
ERCC3P19447 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC8.29□□□□□ -1.08
ERCC3P19447 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
ERCC3P19447 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 AC007382.1-201ENST00000624376 2618 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.29□□□□□ -1.08
ERCC3P19447 AC068860.1-201ENST00000623701 3736 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.29□□□□□ -1.08
ERCC3P19447 RAC1P4-201ENST00000419413 579 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.29□□□□□ -1.08
ERCC3P19447 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC8.29□□□□□ -1.08
ERCC3P19447 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC8.29□□□□□ -1.08
ERCC3P19447 NANOGP9-201ENST00000439890 892 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 AC064862.5-201ENST00000440618 334 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 AL096803.2-201ENST00000450032 677 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 RPL7L1P3-201ENST00000455249 689 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 GAPDHP53-201ENST00000458397 924 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 RN7SL870P-201ENST00000460111 296 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 AC023245.1-201ENST00000468501 517 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC8.29□□□□□ -1.08
ERCC3P19447 RPS12P31-201ENST00000491419 398 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC8.29□□□□□ -1.08
ERCC3P19447 AC147055.3-201ENST00000510547 851 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC8.29□□□□□ -1.08
ERCC3P19447 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.29□□□□□ -1.08
ERCC3P19447 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC8.29□□□□□ -1.08
ERCC3P19447 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 AC005412.1-201ENST00000580812 1049 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 RN7SL178P-201ENST00000582930 304 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 MIR4428-201ENST00000584884 73 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 AC012254.4-201ENST00000588843 273 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC8.29□□□□□ -1.08
ERCC3P19447 AC002487.1-201ENST00000604565 994 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 AL365400.2-201ENST00000605604 902 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC8.29□□□□□ -1.08
ERCC3P19447 AC011330.2-201ENST00000621680 635 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 AC138907.10-201ENST00000623708 983 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 BANCR-201ENST00000624238 473 ntTSL 2 BASIC8.29□□□□□ -1.08
ERCC3P19447 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.29□□□□□ -1.08
ERCC3P19447 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC8.29□□□□□ -1.08
ERCC3P19447 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.29□□□□□ -1.08
ERCC3P19447 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
ERCC3P19447 SPATA31C2-201ENST00000324915 3777 ntBASIC8.29□□□□□ -1.08
ERCC3P19447 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.29□□□□□ -1.08
ERCC3P19447 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
ERCC3P19447 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.29□□□□□ -1.08
ERCC3P19447 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.29□□□□□ -1.08
ERCC3P19447 AC107980.1-201ENST00000558671 3355 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.28□□□□□ -1.08
ERCC3P19447 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC8.28□□□□□ -1.08
ERCC3P19447 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.28□□□□□ -1.08
ERCC3P19447 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC8.28□□□□□ -1.08
ERCC3P19447 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 SNORD56.4-201ENST00000363883 71 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 RN7SKP55-201ENST00000364888 307 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC8.28□□□□□ -1.08
ERCC3P19447 OOSP1-201ENST00000398992 1270 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 AL096711.1-201ENST00000404780 554 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 AL136100.1-201ENST00000407696 330 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC8.28□□□□□ -1.08
ERCC3P19447 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ERCC3P19447 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC8.28□□□□□ -1.08
ERCC3P19447 MTCO2P20-201ENST00000437339 673 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.28□□□□□ -1.08
ERCC3P19447 VN1R25P-201ENST00000443385 738 ntBASIC8.28□□□□□ -1.08
ERCC3P19447 WDR82P2-201ENST00000444540 928 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms