Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC025857.2-201ENST00000602711 238 ntBASIC6.05□□□□□ -1.44
CLPTM1O96005 AC007255.2-201ENST00000604053 631 ntBASIC6.05□□□□□ -1.44
CLPTM1O96005 RN7SL126P-201ENST00000616400 299 ntBASIC6.05□□□□□ -1.44
CLPTM1O96005 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLPTM1O96005 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLPTM1O96005 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLPTM1O96005 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CLPTM1O96005 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLPTM1O96005 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CLPTM1O96005 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CLPTM1O96005 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLPTM1O96005 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLPTM1O96005 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CLPTM1O96005 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CLPTM1O96005 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 AL355488.2-201ENST00000609909 2850 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 U3.23-201ENST00000391132 200 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AL451061.1-201ENST00000407887 862 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.04□□□□□ -1.44
CLPTM1O96005 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.04□□□□□ -1.44
CLPTM1O96005 RN7SKP268-201ENST00000411107 316 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AL663061.1-201ENST00000416625 580 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 DPPA2P2-201ENST00000418220 897 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AC007562.1-201ENST00000421819 517 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AC023274.2-201ENST00000445264 521 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 SNX18P26-201ENST00000458433 740 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AP000805.1-201ENST00000471604 784 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 RN7SL187P-201ENST00000495587 303 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AL135933.1-201ENST00000498657 802 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 RNA5SP96-201ENST00000516041 107 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AC106785.4-201ENST00000569492 412 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AC016839.1-201ENST00000578162 867 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.04□□□□□ -1.44
CLPTM1O96005 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.04□□□□□ -1.44
CLPTM1O96005 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AL157899.1-201ENST00000604110 936 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 LSM1P2-201ENST00000604911 322 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AL078624.2-201ENST00000605063 554 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AL445649.1-201ENST00000615941 691 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AC069234.4-201ENST00000621276 412 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AP002800.1-201ENST00000624982 2225 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.04□□□□□ -1.44
CLPTM1O96005 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 AL161912.4-201ENST00000623889 2468 ntBASIC6.04□□□□□ -1.44
CLPTM1O96005 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.04□□□□□ -1.44
CLPTM1O96005 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLPTM1O96005 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.03□□□□□ -1.44
CLPTM1O96005 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLPTM1O96005 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLPTM1O96005 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.03□□□□□ -1.44
CLPTM1O96005 NEK2P2-201ENST00000438441 1338 ntBASIC6.03□□□□□ -1.44
CLPTM1O96005 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLPTM1O96005 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLPTM1O96005 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLPTM1O96005 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLPTM1O96005 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLPTM1O96005 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.03□□□□□ -1.44
CLPTM1O96005 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CLPTM1O96005 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLPTM1O96005 AL121977.1-201ENST00000401636 979 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms