Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 CYCSP11-201ENST00000436426 315 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 CALM1P2-201ENST00000452941 448 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 RPL10P17-201ENST00000453852 316 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 MEF2AP1-201ENST00000454867 863 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 NMNAT1P3-201ENST00000457517 888 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 WBP1LP1-201ENST00000460451 896 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 RPL5P13-201ENST00000462840 709 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC018523.1-201ENST00000534211 512 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC012157.1-201ENST00000549725 501 ntTSL 4 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AC097717.1-251ENST00000608419 183 ntTSL 5 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 EEF1A1P2-201ENST00000553854 1447 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AF287957.1-201ENST00000607368 1595 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 AL592429.1-201ENST00000403909 1473 ntBASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGB1P1B2RPK0 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HMGB1P1B2RPK0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HMGB1P1B2RPK0 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.71□□□□□ -1.33
HMGB1P1B2RPK0 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HMGB1P1B2RPK0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HMGB1P1B2RPK0 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HMGB1P1B2RPK0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
HMGB1P1B2RPK0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
HMGB1P1B2RPK0 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC006484.1-201ENST00000435086 1884 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 GNG5P2-201ENST00000372054 207 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 RNU6-152P-201ENST00000384037 107 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 VDAC2P1-201ENST00000399358 958 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 VDAC1P10-201ENST00000416715 891 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 RFESDP1-201ENST00000422350 461 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC015983.1-201ENST00000441577 373 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 EIF2S2P4-201ENST00000461070 984 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC117382.1-201ENST00000468074 730 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 OR5M6P-201ENST00000530227 937 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC233702.7-202ENST00000582941 211 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC034236.3-201ENST00000605999 461 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 RN7SL126P-201ENST00000616400 299 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 uc_338.37-201ENST00000620113 186 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AP001005.3-201ENST00000622049 129 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 AC073488.7-201ENST00000633785 778 ntBASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.71□□□□□ -1.34
HMGB1P1B2RPK0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms