Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 SNORD8-201ENST00000363915 110 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC116036.1-201ENST00000412199 367 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC083855.1-201ENST00000440041 258 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 RN7SL372P-201ENST00000461982 298 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 RN7SL70P-201ENST00000478322 302 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 MRPL57P6-201ENST00000506570 309 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 RN7SKP196-201ENST00000516267 345 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC245052.7-201ENST00000601161 359 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC093635.1-201ENST00000609028 555 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 MRPL57P1-201ENST00000621486 265 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AL731532.1-201ENST00000623972 4236 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AL662795.2-201ENST00000624252 3706 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AP003486.1-201ENST00000525716 3994 ntBASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.63□□□□□ -1.51
RHBDD3Q9Y3P4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 RNA5SP140-201ENST00000364524 92 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 RNA5SP442-201ENST00000365050 107 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AL359092.1-201ENST00000417156 265 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 PTPN2P1-201ENST00000423212 1072 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 UBBP5-201ENST00000446970 266 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AC022080.2-201ENST00000452932 533 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 RPS3AP49-201ENST00000472161 790 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 RN7SL655P-201ENST00000486087 298 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 PPP1R11P1-201ENST00000486095 376 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AL079303.1-201ENST00000486611 463 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 RN7SL350P-201ENST00000492591 299 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 SETP21-201ENST00000514799 892 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 OR4A40P-201ENST00000533878 948 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 RN7SL32P-201ENST00000580514 281 ntBASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.62□□□□□ -1.51
RHBDD3Q9Y3P4 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms