Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AL445383.1-201ENST00000554689 874 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC244034.2-201ENST00000562504 509 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC091304.4-201ENST00000565703 620 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AGGF1P5-201ENST00000567900 919 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC024267.2-201ENST00000582737 417 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AP002345.2-201ENST00000609961 904 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC122108.2-201ENST00000611946 526 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AP001885.1-201ENST00000621658 558 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC027559.1-201ENST00000636288 271 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AL133243.4-201ENST00000623116 3109 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 AC092821.3-202ENST00000641304 2767 ntBASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP1Q96SZ6 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.02□□□□□ -1.28
CDK5RAP1Q96SZ6 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CDK5RAP1Q96SZ6 MAPK10-357ENST00000641831 2858 ntBASIC7.02□□□□□ -1.28
CDK5RAP1Q96SZ6 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.28
CDK5RAP1Q96SZ6 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.28
CDK5RAP1Q96SZ6 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
CDK5RAP1Q96SZ6 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC093829.1-201ENST00000506662 1618 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 PTCD2P2-201ENST00000415579 1095 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 RPS7P12-201ENST00000422385 582 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC245452.2-201ENST00000435222 392 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 MTCO2P20-201ENST00000437339 673 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 SEPT14P12-201ENST00000442280 560 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AL031681.1-201ENST00000443304 400 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC092685.1-201ENST00000447960 1243 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC016550.1-201ENST00000505348 785 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 MORF4L1P3-201ENST00000525966 950 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC092375.1-201ENST00000550410 637 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC005519.1-201ENST00000554490 601 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC074141.1-201ENST00000588129 2995 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC091057.3-201ENST00000602684 733 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC005776.1-201ENST00000603164 290 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AL390877.1-201ENST00000605704 214 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC135803.1-201ENST00000608748 565 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 MIR6885-201ENST00000612241 66 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 HTR1DP1-201ENST00000616500 888 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 RAB28P4-201ENST00000622233 665 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC120057.5-201ENST00000623840 154 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC068213.1-201ENST00000625124 226 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 Z93929.1-201ENST00000418200 1475 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 ENO1P4-201ENST00000416471 1785 ntBASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP1Q96SZ6 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms