Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC105749.1-201ENST00000631338 2008 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 RNA5SP308-201ENST00000362532 115 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC092634.1-201ENST00000366505 199 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AP003385.1-201ENST00000426387 893 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 VN1R53P-201ENST00000429536 957 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 BMP6P1-201ENST00000431230 679 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC092106.2-201ENST00000436597 487 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 HMGN1P32-201ENST00000441744 256 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 COL11A2P1-205ENST00000441798 676 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AL020997.1-201ENST00000446554 349 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 RPL5P33-201ENST00000487833 905 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC009567.2-201ENST00000502989 349 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC093870.1-201ENST00000506837 213 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 NIFKP4-201ENST00000567275 1192 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC004805.3-201ENST00000603178 310 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC114477.1-201ENST00000605097 605 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 MIR6070-201ENST00000613967 103 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC004023.1-201ENST00000561473 1744 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC067942.1-201ENST00000488045 1493 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC006600.2-201ENST00000624834 2506 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 SAGE3P-201ENST00000619800 1635 ntBASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.3□□□□□ -1.56
ZNF439Q8NDP4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AL049634.1-201ENST00000453770 1720 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 SNORA70H-201ENST00000383910 135 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 SNORA70J-201ENST00000384182 135 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AL391419.1-201ENST00000398901 1275 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 U3.43-201ENST00000410734 213 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 OR52N3P-201ENST00000413417 934 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AC006509.1-201ENST00000420788 634 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AL589794.1-201ENST00000424971 390 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 VN1R38P-201ENST00000450265 887 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 SNX18P26-201ENST00000458433 740 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AC122714.1-201ENST00000502510 459 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 IGHV1-14-201ENST00000523391 241 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 AC092718.4-201ENST00000566639 716 ntBASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.29□□□□□ -1.56
ZNF439Q8NDP4 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms