Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC138512.1-201ENST00000563190 434 ntTSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC020914.6-201ENST00000594327 272 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC008622.1-201ENST00000597106 284 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 GPC6-202ENST00000617456 792 ntTSL 3 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC026336.5-201ENST00000624455 738 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC091953.4-201ENST00000625179 341 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 ITFG2-AS1-202ENST00000636122 962 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 FAM238C-205ENST00000640641 391 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 AC023818.2-201ENST00000623817 2304 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 DCAF13P3-201ENST00000561147 1334 ntBASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
DEPDC4Q8N2C3 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 RNU6-374P-201ENST00000364146 108 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 FRG1JP-201ENST00000376334 931 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 HEATR5A-201ENST00000382464 507 ntTSL 2 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 Y_RNA.554-201ENST00000384672 102 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 FGF7P8-201ENST00000402994 292 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL139098.1-201ENST00000407291 389 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL022332.1-201ENST00000411511 428 ntTSL 5 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 SNRPGP11-201ENST00000411777 232 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 USP9YP6-201ENST00000413550 854 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL034379.1-201ENST00000423216 253 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 DPY19L1P2-201ENST00000426647 915 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 UBE2V1P3-201ENST00000439651 417 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 TRIM60P16-201ENST00000444048 694 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 MTCO1P48-201ENST00000448024 1096 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 MTND3P10-201ENST00000450967 341 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 USP9YP34-201ENST00000453983 808 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 ARAFP3-201ENST00000454154 490 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 RPS20P23-201ENST00000461683 354 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL121769.1-201ENST00000469473 401 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC090013.1-201ENST00000485147 480 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC079598.4-201ENST00000549647 265 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 GTF2IP22-201ENST00000554443 182 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC096708.1-201ENST00000584419 658 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL133351.4-201ENST00000604204 631 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 MIR4435-2HG-217ENST00000604981 759 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC008945.2-201ENST00000606056 604 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL135999.3-201ENST00000610501 812 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC007336.2-201ENST00000611626 557 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms