Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC024884.1-201ENST00000620583 399 ntBASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 AC083806.2-201ENST00000617795 2685 ntBASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SHROOM1Q2M3G4 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AC062022.1-201ENST00000451026 1684 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AC078880.4-201ENST00000617627 1749 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AC009135.2-201ENST00000624136 1768 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 RN7SKP78-201ENST00000364711 318 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 RBMY2AP-201ENST00000445405 1157 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 CEACAMP5-201ENST00000448037 961 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 RBMY2CP-201ENST00000448575 1157 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 RBMY2DP-202ENST00000448881 1157 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 RBMY2BP-202ENST00000451071 1156 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 CST12P-201ENST00000457644 362 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AC025458.1-201ENST00000506046 166 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 IGLV3-6-201ENST00000523937 250 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 RN7SL753P-201ENST00000581238 290 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 MIR3614-201ENST00000581261 86 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 FO681491.1-202ENST00000623392 737 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHROOM1Q2M3G4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 TMSB4XP2-201ENST00000335179 210 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AC092642.1-201ENST00000392417 425 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 RPS3P2-201ENST00000421346 701 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 CDY8P-201ENST00000428380 1279 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 CDY20P-201ENST00000447528 1279 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 HIGD1AP16-201ENST00000450986 258 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AL359839.1-201ENST00000451975 1160 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 PPIAP27-201ENST00000453800 265 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 OR2AF1P-201ENST00000454899 889 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AC009963.3-201ENST00000458090 486 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 OR5H7P-201ENST00000514084 930 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 NATP-201ENST00000523491 878 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AP000662.1-201ENST00000530952 487 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AC073389.3-201ENST00000609434 935 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.41□□□□□ -1.22
SHROOM1Q2M3G4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms