Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AP001357.1-201ENST00000586304 1053 ntBASIC4.37□□□□□ -1.71
RPL39P62891 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC4.37□□□□□ -1.71
RPL39P62891 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC4.37□□□□□ -1.71
RPL39P62891 EXOSC3P2-201ENST00000594464 497 ntBASIC4.37□□□□□ -1.71
RPL39P62891 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC4.37□□□□□ -1.71
RPL39P62891 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC4.37□□□□□ -1.71
RPL39P62891 MIR7159-201ENST00000620587 66 ntBASIC4.37□□□□□ -1.71
RPL39P62891 AC127071.2-201ENST00000623293 527 ntBASIC4.37□□□□□ -1.71
RPL39P62891 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 AC025470.1-201ENST00000510053 2032 ntBASIC4.37□□□□□ -1.71
RPL39P62891 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.37□□□□□ -1.71
RPL39P62891 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPL39P62891 EEF1A1P28-201ENST00000450915 1403 ntBASIC4.37□□□□□ -1.71
RPL39P62891 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.37□□□□□ -1.71
RPL39P62891 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC4.37□□□□□ -1.71
RPL39P62891 AL355834.1-201ENST00000556602 3965 ntBASIC4.37□□□□□ -1.71
RPL39P62891 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.37□□□□□ -1.71
RPL39P62891 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RPL39P62891 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 AL049634.1-201ENST00000453770 1720 ntBASIC4.36□□□□□ -1.71
RPL39P62891 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.36□□□□□ -1.71
RPL39P62891 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 RNA5SP382-201ENST00000363355 112 ntBASIC4.36□□□□□ -1.71
RPL39P62891 SNORD35A-201ENST00000363389 86 ntBASIC4.36□□□□□ -1.71
RPL39P62891 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RPL39P62891 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC4.36□□□□□ -1.71
RPL39P62891 CLIC4P3-201ENST00000422221 752 ntBASIC4.36□□□□□ -1.71
RPL39P62891 AL596268.1-201ENST00000427910 1048 ntBASIC4.36□□□□□ -1.71
RPL39P62891 MED28P4-201ENST00000433137 572 ntBASIC4.36□□□□□ -1.71
RPL39P62891 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC4.36□□□□□ -1.71
RPL39P62891 PHBP4-201ENST00000437447 837 ntBASIC4.36□□□□□ -1.71
RPL39P62891 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC4.36□□□□□ -1.71
RPL39P62891 AC016908.1-201ENST00000442571 1219 ntBASIC4.36□□□□□ -1.71
RPL39P62891 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC4.36□□□□□ -1.71
RPL39P62891 CCNJP1-201ENST00000450600 1149 ntBASIC4.36□□□□□ -1.71
RPL39P62891 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.36□□□□□ -1.71
RPL39P62891 RANP2-201ENST00000456833 229 ntBASIC4.36□□□□□ -1.71
RPL39P62891 RN7SL868P-201ENST00000485915 303 ntBASIC4.36□□□□□ -1.71
RPL39P62891 RPL5P3-201ENST00000493817 889 ntBASIC4.36□□□□□ -1.71
RPL39P62891 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC4.36□□□□□ -1.71
RPL39P62891 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.36□□□□□ -1.71
RPL39P62891 AP006437.1-202ENST00000530327 933 ntBASIC4.36□□□□□ -1.71
RPL39P62891 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.36□□□□□ -1.71
RPL39P62891 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC4.36□□□□□ -1.71
RPL39P62891 DCN-215ENST00000550099 719 ntTSL 2 BASIC4.36□□□□□ -1.71
RPL39P62891 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC4.36□□□□□ -1.71
RPL39P62891 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC4.36□□□□□ -1.71
RPL39P62891 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 AP006587.6-201ENST00000582128 1091 ntBASIC4.36□□□□□ -1.71
RPL39P62891 AC020916.2-201ENST00000591242 360 ntBASIC4.36□□□□□ -1.71
RPL39P62891 AL589863.1-201ENST00000595383 631 ntBASIC4.36□□□□□ -1.71
RPL39P62891 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC4.36□□□□□ -1.71
RPL39P62891 OR7A1P-201ENST00000601206 970 ntBASIC4.36□□□□□ -1.71
RPL39P62891 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC4.36□□□□□ -1.71
RPL39P62891 TP53TG1_2.1-201ENST00000611226 182 ntBASIC4.36□□□□□ -1.71
RPL39P62891 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.36□□□□□ -1.71
RPL39P62891 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 RBPJP6-201ENST00000411556 1431 ntBASIC4.36□□□□□ -1.71
RPL39P62891 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RPL39P62891 AL353743.3-201ENST00000442109 1468 ntBASIC4.36□□□□□ -1.71
RPL39P62891 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
RPL39P62891 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.36□□□□□ -1.71
RPL39P62891 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RPL39P62891 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RPL39P62891 AC095038.1-201ENST00000429248 1591 ntBASIC4.36□□□□□ -1.71
RPL39P62891 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPL39P62891 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC4.35□□□□□ -1.71
RPL39P62891 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.35□□□□□ -1.71
RPL39P62891 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPL39P62891 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.35□□□□□ -1.71
RPL39P62891 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.35□□□□□ -1.71
RPL39P62891 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
RPL39P62891 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms