Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RNA5SP333-201ENST00000363466 118 ntBASIC6.75□□□□□ -1.33
LHX1P48742 RNA5SP334-201ENST00000364825 118 ntBASIC6.75□□□□□ -1.33
LHX1P48742 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LHX1P48742 U3.43-201ENST00000410734 213 ntBASIC6.75□□□□□ -1.33
LHX1P48742 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.75□□□□□ -1.33
LHX1P48742 AC092865.3-201ENST00000425390 1026 ntBASIC6.75□□□□□ -1.33
LHX1P48742 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.75□□□□□ -1.33
LHX1P48742 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.75□□□□□ -1.33
LHX1P48742 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.75□□□□□ -1.33
LHX1P48742 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.75□□□□□ -1.33
LHX1P48742 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.75□□□□□ -1.33
LHX1P48742 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.75□□□□□ -1.33
LHX1P48742 SNX18P26-201ENST00000458433 740 ntBASIC6.75□□□□□ -1.33
LHX1P48742 AC104339.1-201ENST00000465478 348 ntBASIC6.75□□□□□ -1.33
LHX1P48742 Vault.2-201ENST00000516519 98 ntBASIC6.75□□□□□ -1.33
LHX1P48742 RN7SKP70-201ENST00000516655 271 ntBASIC6.75□□□□□ -1.33
LHX1P48742 AC073581.1-201ENST00000519036 575 ntBASIC6.75□□□□□ -1.33
LHX1P48742 IGHV1-14-201ENST00000523391 241 ntBASIC6.75□□□□□ -1.33
LHX1P48742 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.75□□□□□ -1.33
LHX1P48742 AC026826.3-201ENST00000561747 158 ntBASIC6.75□□□□□ -1.33
LHX1P48742 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.75□□□□□ -1.33
LHX1P48742 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.75□□□□□ -1.33
LHX1P48742 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.75□□□□□ -1.33
LHX1P48742 RPSAP75-201ENST00000605848 301 ntBASIC6.75□□□□□ -1.33
LHX1P48742 AL008723.3-201ENST00000608926 449 ntBASIC6.75□□□□□ -1.33
LHX1P48742 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
LHX1P48742 AC097641.3-201ENST00000613523 464 ntBASIC6.75□□□□□ -1.33
LHX1P48742 MIR7159-201ENST00000620587 66 ntBASIC6.75□□□□□ -1.33
LHX1P48742 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
LHX1P48742 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.75□□□□□ -1.33
LHX1P48742 TNPO1P2-201ENST00000426249 2665 ntBASIC6.75□□□□□ -1.33
LHX1P48742 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
LHX1P48742 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LHX1P48742 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.75□□□□□ -1.33
LHX1P48742 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
LHX1P48742 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.75□□□□□ -1.33
LHX1P48742 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LHX1P48742 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.74□□□□□ -1.33
LHX1P48742 AC073342.2-201ENST00000595842 1800 ntBASIC6.74□□□□□ -1.33
LHX1P48742 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.74□□□□□ -1.33
LHX1P48742 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 RNA5SP478-201ENST00000364657 115 ntBASIC6.74□□□□□ -1.33
LHX1P48742 VN1R12P-201ENST00000403778 876 ntBASIC6.74□□□□□ -1.33
LHX1P48742 AL035422.1-201ENST00000414193 397 ntBASIC6.74□□□□□ -1.33
LHX1P48742 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.74□□□□□ -1.33
LHX1P48742 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.74□□□□□ -1.33
LHX1P48742 FABP5P2-201ENST00000439042 408 ntBASIC6.74□□□□□ -1.33
LHX1P48742 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.74□□□□□ -1.33
LHX1P48742 HMGB1P7-201ENST00000450921 612 ntBASIC6.74□□□□□ -1.33
LHX1P48742 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.74□□□□□ -1.33
LHX1P48742 AC095052.1-201ENST00000509955 863 ntBASIC6.74□□□□□ -1.33
LHX1P48742 HSD3BP3-201ENST00000514706 994 ntBASIC6.74□□□□□ -1.33
LHX1P48742 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.74□□□□□ -1.33
LHX1P48742 AP004607.6-201ENST00000525033 1202 ntBASIC6.74□□□□□ -1.33
LHX1P48742 AC036111.2-201ENST00000533247 901 ntBASIC6.74□□□□□ -1.33
LHX1P48742 AC084121.1-201ENST00000533882 835 ntBASIC6.74□□□□□ -1.33
LHX1P48742 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.74□□□□□ -1.33
LHX1P48742 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.74□□□□□ -1.33
LHX1P48742 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.74□□□□□ -1.33
LHX1P48742 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.74□□□□□ -1.33
LHX1P48742 AC009120.3-201ENST00000563335 499 ntBASIC6.74□□□□□ -1.33
LHX1P48742 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.74□□□□□ -1.33
LHX1P48742 AC004232.2-201ENST00000574245 821 ntBASIC6.74□□□□□ -1.33
LHX1P48742 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.74□□□□□ -1.33
LHX1P48742 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.74□□□□□ -1.33
LHX1P48742 AC073593.1-201ENST00000624500 411 ntBASIC6.74□□□□□ -1.33
LHX1P48742 AL357140.4-201ENST00000636827 412 ntBASIC6.74□□□□□ -1.33
LHX1P48742 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.74□□□□□ -1.33
LHX1P48742 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.74□□□□□ -1.33
LHX1P48742 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.74□□□□□ -1.33
LHX1P48742 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
LHX1P48742 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
LHX1P48742 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 OR2AH1P-202ENST00000641232 2744 ntBASIC6.74□□□□□ -1.33
LHX1P48742 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
LHX1P48742 AC006213.6-201ENST00000623722 4179 ntBASIC6.74□□□□□ -1.33
LHX1P48742 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.74□□□□□ -1.33
LHX1P48742 AL731556.1-201ENST00000394628 3711 ntBASIC6.74□□□□□ -1.33
LHX1P48742 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LHX1P48742 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
LHX1P48742 AL359976.1-201ENST00000418655 3528 ntBASIC6.73□□□□□ -1.33
LHX1P48742 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.73□□□□□ -1.33
LHX1P48742 MTCO1P46-201ENST00000451639 1491 ntBASIC6.73□□□□□ -1.33
LHX1P48742 CYP2G2P-201ENST00000594920 1485 ntBASIC6.73□□□□□ -1.33
LHX1P48742 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
LHX1P48742 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.73□□□□□ -1.33
LHX1P48742 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms