Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 MTCO2P31-201ENST00000402702 684 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.31□□□□□ -1.08
ERCC3P19447 RPS21P8-201ENST00000413365 247 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AL449283.1-202ENST00000418249 604 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 PNRC2P1-201ENST00000423940 420 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AC245047.2-201ENST00000441060 530 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC8.31□□□□□ -1.08
ERCC3P19447 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC8.31□□□□□ -1.08
ERCC3P19447 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 OFD1P7Y-201ENST00000454643 1155 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.31□□□□□ -1.08
ERCC3P19447 RN7SL372P-201ENST00000461982 298 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC8.31□□□□□ -1.08
ERCC3P19447 PSMA2P2-201ENST00000504319 686 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AC108120.1-201ENST00000506543 991 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AC005351.1-201ENST00000511152 786 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.31□□□□□ -1.08
ERCC3P19447 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.31□□□□□ -1.08
ERCC3P19447 GLYATL1P4-201ENST00000529326 906 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AP003717.3-201ENST00000544832 1180 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AC009729.1-201ENST00000548873 1133 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AC087888.1-201ENST00000550884 1254 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 CSNK1A1P1-202ENST00000563423 981 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 AC023824.3-201ENST00000569003 562 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AC027455.1-201ENST00000574104 594 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.31□□□□□ -1.08
ERCC3P19447 RN7SL667P-201ENST00000582817 298 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 RPS27AP19-201ENST00000597285 458 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC8.31□□□□□ -1.08
ERCC3P19447 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8.31□□□□□ -1.08
ERCC3P19447 AL121809.2-201ENST00000613169 341 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AL359513.1-201ENST00000614364 557 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC8.31□□□□□ -1.08
ERCC3P19447 AC120349.3-201ENST00000624377 529 ntBASIC8.31□□□□□ -1.08
ERCC3P19447 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC8.31□□□□□ -1.08
ERCC3P19447 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.31□□□□□ -1.08
ERCC3P19447 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC8.31□□□□□ -1.08
ERCC3P19447 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC8.31□□□□□ -1.08
ERCC3P19447 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 CA1-225ENST00000626824 2405 ntTSL 5 BASIC8.31□□□□□ -1.08
ERCC3P19447 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.31□□□□□ -1.08
ERCC3P19447 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.31□□□□□ -1.08
ERCC3P19447 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
ERCC3P19447 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.3□□□□□ -1.08
ERCC3P19447 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
ERCC3P19447 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.3□□□□□ -1.08
ERCC3P19447 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.3□□□□□ -1.08
ERCC3P19447 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
ERCC3P19447 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
ERCC3P19447 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
ERCC3P19447 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC8.3□□□□□ -1.08
ERCC3P19447 RNU6-906P-201ENST00000384700 70 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 MIR99A-201ENST00000384906 81 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
ERCC3P19447 RPL5P8-201ENST00000396820 815 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 RNA5SP280-201ENST00000411230 115 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 RN7SKP85-201ENST00000411349 318 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 AL672212.1-201ENST00000422246 400 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 AL358794.1-201ENST00000445689 381 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 AC069540.1-201ENST00000446320 988 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 RHEBP1-201ENST00000448647 556 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC8.3□□□□□ -1.08
ERCC3P19447 OR52E7P-201ENST00000452394 933 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 AC022080.2-201ENST00000452932 533 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC8.3□□□□□ -1.08
ERCC3P19447 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC8.3□□□□□ -1.08
ERCC3P19447 SNRPCP11-201ENST00000492453 205 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 MTCYBP35-201ENST00000503630 1137 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 OXR1-212ENST00000521592 993 ntTSL 5 BASIC8.3□□□□□ -1.08
ERCC3P19447 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
ERCC3P19447 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.3□□□□□ -1.08
ERCC3P19447 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC8.3□□□□□ -1.08
ERCC3P19447 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC8.3□□□□□ -1.08
ERCC3P19447 HNRNPA1P71-201ENST00000559135 950 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC8.3□□□□□ -1.08
ERCC3P19447 AC245036.5-201ENST00000596330 847 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
ERCC3P19447 AC008115.4-201ENST00000619780 775 ntBASIC8.3□□□□□ -1.08
ERCC3P19447 Z99129.2-201ENST00000619967 314 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 396.1 ms