Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.87□□□□□ -1.47
ZIC3O60481 AL031651.1-201ENST00000615357 1438 ntBASIC5.87□□□□□ -1.47
ZIC3O60481 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
ZIC3O60481 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ZIC3O60481 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ZIC3O60481 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ZIC3O60481 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ZIC3O60481 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
ZIC3O60481 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ZIC3O60481 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
ZIC3O60481 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ZIC3O60481 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ZIC3O60481 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.86□□□□□ -1.47
ZIC3O60481 AC025809.2-201ENST00000625085 1802 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ZIC3O60481 CDY10P-201ENST00000452415 1567 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
ZIC3O60481 AL353743.3-201ENST00000442109 1468 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ZIC3O60481 RN7SKP250-201ENST00000363924 321 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 RNA5SP512-201ENST00000364550 120 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 AL607077.1-201ENST00000401718 499 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
ZIC3O60481 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.86□□□□□ -1.47
ZIC3O60481 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.86□□□□□ -1.47
ZIC3O60481 KIF4CP-201ENST00000422742 1279 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.86□□□□□ -1.47
ZIC3O60481 AC003989.1-201ENST00000434569 565 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 SDR42E1P3-201ENST00000438345 502 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.86□□□□□ -1.47
ZIC3O60481 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 RARRES2P3-201ENST00000457739 473 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 AC092824.1-201ENST00000483524 576 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 RPL29P23-201ENST00000486188 442 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 AC022206.1-201ENST00000495947 347 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.86□□□□□ -1.47
ZIC3O60481 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.86□□□□□ -1.47
ZIC3O60481 AC093816.1-201ENST00000515076 913 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 SNORA70.17-201ENST00000516449 133 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.86□□□□□ -1.47
ZIC3O60481 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.86□□□□□ -1.47
ZIC3O60481 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.86□□□□□ -1.47
ZIC3O60481 AC023968.1-201ENST00000560719 475 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 MT1CP-201ENST00000567054 174 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 AC026898.1-201ENST00000586404 571 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.86□□□□□ -1.47
ZIC3O60481 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.86□□□□□ -1.47
ZIC3O60481 AC012676.3-201ENST00000614983 479 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 AC020978.9-201ENST00000624380 1141 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC5.86□□□□□ -1.47
ZIC3O60481 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.86□□□□□ -1.47
ZIC3O60481 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZIC3O60481 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.86□□□□□ -1.47
ZIC3O60481 RAD17P2-201ENST00000451754 1977 ntBASIC5.86□□□□□ -1.47
ZIC3O60481 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
ZIC3O60481 AL359195.2-201ENST00000623657 4412 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZIC3O60481 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZIC3O60481 SAGE3P-201ENST00000619800 1635 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZIC3O60481 AC024341.1-201ENST00000526444 1552 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.85□□□□□ -1.47
ZIC3O60481 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZIC3O60481 LINC01616-201ENST00000561816 2280 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC5.85□□□□□ -1.47
ZIC3O60481 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.85□□□□□ -1.47
ZIC3O60481 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.85□□□□□ -1.47
ZIC3O60481 RNA5SP77-201ENST00000365394 120 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 OR6K3-202ENST00000368146 996 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ZIC3O60481 AL023284.3-201ENST00000407767 334 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ZIC3O60481 RN7SKP281-201ENST00000410472 352 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 AC017035.1-201ENST00000411999 1115 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.85□□□□□ -1.47
ZIC3O60481 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.85□□□□□ -1.47
ZIC3O60481 MTCO3P43-201ENST00000440974 771 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 RN7SL39P-201ENST00000462264 297 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ZIC3O60481 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.85□□□□□ -1.47
ZIC3O60481 AL117692.1-201ENST00000494283 713 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 RNA5SP418-201ENST00000515951 117 ntBASIC5.85□□□□□ -1.47
ZIC3O60481 SNORA74.1-201ENST00000516320 180 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms