Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
SNED1Q8TER0 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SNED1Q8TER0 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SNED1Q8TER0 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SNED1Q8TER0 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 MROH3P-201ENST00000435735 2676 ntBASIC7.65□□□□□ -1.18
SNED1Q8TER0 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SNED1Q8TER0 RNU1-134P-201ENST00000362935 165 ntBASIC7.65□□□□□ -1.18
SNED1Q8TER0 EEF1B2P8-201ENST00000414101 671 ntBASIC7.65□□□□□ -1.18
SNED1Q8TER0 AL121776.1-201ENST00000429337 372 ntBASIC7.65□□□□□ -1.18
SNED1Q8TER0 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 SUMO2P10-201ENST00000452006 288 ntBASIC7.65□□□□□ -1.18
SNED1Q8TER0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SNED1Q8TER0 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 AC021269.1-201ENST00000526860 705 ntBASIC7.65□□□□□ -1.18
SNED1Q8TER0 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 AC016180.1-201ENST00000567945 403 ntBASIC7.65□□□□□ -1.18
SNED1Q8TER0 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 AC092681.3-201ENST00000609463 678 ntBASIC7.65□□□□□ -1.18
SNED1Q8TER0 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.65□□□□□ -1.18
SNED1Q8TER0 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.65□□□□□ -1.19
SNED1Q8TER0 AC062022.1-201ENST00000451026 1684 ntBASIC7.65□□□□□ -1.19
SNED1Q8TER0 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
SNED1Q8TER0 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
SNED1Q8TER0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SNED1Q8TER0 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
SNED1Q8TER0 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SNED1Q8TER0 AC110597.1-201ENST00000562669 3176 ntBASIC7.65□□□□□ -1.19
SNED1Q8TER0 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
SNED1Q8TER0 AL139384.2-201ENST00000613809 3590 ntBASIC7.65□□□□□ -1.19
SNED1Q8TER0 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
SNED1Q8TER0 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.65□□□□□ -1.19
SNED1Q8TER0 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.65□□□□□ -1.19
SNED1Q8TER0 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNED1Q8TER0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNED1Q8TER0 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNED1Q8TER0 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNED1Q8TER0 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SNED1Q8TER0 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.64□□□□□ -1.19
SNED1Q8TER0 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SNED1Q8TER0 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.64□□□□□ -1.19
SNED1Q8TER0 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.64□□□□□ -1.19
SNED1Q8TER0 AC010624.4-201ENST00000597606 1351 ntBASIC7.64□□□□□ -1.19
SNED1Q8TER0 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
SNED1Q8TER0 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SNED1Q8TER0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.64□□□□□ -1.19
SNED1Q8TER0 SBDSP1-204ENST00000453858 737 ntBASIC7.64□□□□□ -1.19
SNED1Q8TER0 AC008410.1-201ENST00000483777 339 ntBASIC7.64□□□□□ -1.19
SNED1Q8TER0 TMEM97P2-201ENST00000517841 403 ntBASIC7.64□□□□□ -1.19
SNED1Q8TER0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.64□□□□□ -1.19
SNED1Q8TER0 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.64□□□□□ -1.19
SNED1Q8TER0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.64□□□□□ -1.19
SNED1Q8TER0 MAPK10-323ENST00000641493 3207 ntBASIC7.64□□□□□ -1.19
SNED1Q8TER0 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNED1Q8TER0 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.64□□□□□ -1.19
SNED1Q8TER0 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNED1Q8TER0 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNED1Q8TER0 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SNED1Q8TER0 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNED1Q8TER0 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.64□□□□□ -1.19
SNED1Q8TER0 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SNED1Q8TER0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
SNED1Q8TER0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 OR2M1P-201ENST00000318104 951 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 RPL35AP3-201ENST00000414680 288 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 PPIAP10-201ENST00000438675 458 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 FTLP8-201ENST00000446770 267 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 AL445665.1-202ENST00000452436 324 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 RN7SL515P-201ENST00000463999 297 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 AL136038.1-201ENST00000497246 351 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 IGKV1D-22-201ENST00000518953 324 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 IGLV3-6-201ENST00000523937 250 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 COX6CP7-201ENST00000597056 208 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 BNIP3P32-201ENST00000600015 554 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 RN7SL787P-201ENST00000613000 284 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 AC096708.4-201ENST00000620563 552 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 AC116667.2-201ENST00000641075 823 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 AC011416.1-201ENST00000514947 1732 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SNED1Q8TER0 AC110373.1-201ENST00000505994 3505 ntBASIC7.63□□□□□ -1.19
SNED1Q8TER0 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
SNED1Q8TER0 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.63□□□□□ -1.19
SNED1Q8TER0 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms