Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ZNF549Q6P9A3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 MAPK10-287ENST00000641217 3037 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 BIN2P1-201ENST00000504996 1530 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 RNU1-84P-201ENST00000365447 164 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 RN7SKP281-201ENST00000410472 352 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 RNA5SP155-201ENST00000411154 129 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 EIF2S2P3-201ENST00000428356 999 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 SNX18P26-201ENST00000458433 740 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 OR52A4P-202ENST00000481634 799 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 OR52A4P-203ENST00000498233 1014 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AC018645.1-201ENST00000505003 109 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AC093325.1-201ENST00000508378 326 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AP002981.1-201ENST00000517692 975 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AC090079.2-201ENST00000575289 768 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AL008723.3-201ENST00000608926 449 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 LINC02495-203ENST00000636704 242 ntBASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.36□□□□□ -1.39
ZNF549Q6P9A3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 RNA5SP350-201ENST00000363298 111 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 ARSFP1-201ENST00000398758 477 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 MTND3P20-201ENST00000407663 186 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 CYP4F30P-202ENST00000420048 405 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 RPS19P6-201ENST00000441327 433 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 GAPDHP37-201ENST00000442317 968 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC092967.1-201ENST00000449016 481 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 VN1R38P-201ENST00000450265 887 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 RPL31P11-202ENST00000454082 372 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC022730.1-201ENST00000473114 568 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 RN7SL165P-201ENST00000477476 291 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 IGKV1D-22-201ENST00000518953 324 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 TPRX1P1-201ENST00000557620 319 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC105036.1-201ENST00000566222 271 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC012175.1-201ENST00000603755 531 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AL355816.2-201ENST00000610049 647 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AC239803.2-201ENST00000610161 430 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AL354696.1-201ENST00000614652 497 ntBASIC6.35□□□□□ -1.39
ZNF549Q6P9A3 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms