Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.59□□□□□ -1.19
PMS1P54277 RNU4-5P-201ENST00000607255 135 ntBASIC7.59□□□□□ -1.19
PMS1P54277 AC092954.1-201ENST00000609121 445 ntBASIC7.59□□□□□ -1.19
PMS1P54277 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.59□□□□□ -1.19
PMS1P54277 MIR6726-201ENST00000613751 61 ntBASIC7.59□□□□□ -1.19
PMS1P54277 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC7.59□□□□□ -1.19
PMS1P54277 CXADRP3-202ENST00000617265 1100 ntBASIC7.59□□□□□ -1.19
PMS1P54277 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.59□□□□□ -1.19
PMS1P54277 AC004943.3-201ENST00000624116 600 ntBASIC7.59□□□□□ -1.19
PMS1P54277 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC7.59□□□□□ -1.19
PMS1P54277 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PMS1P54277 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.59□□□□□ -1.19
PMS1P54277 AP002833.3-201ENST00000625075 2265 ntBASIC7.59□□□□□ -1.19
PMS1P54277 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
PMS1P54277 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
PMS1P54277 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.59□□□□□ -1.19
PMS1P54277 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.59□□□□□ -1.19
PMS1P54277 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PMS1P54277 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
PMS1P54277 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
PMS1P54277 ATP5BP1-201ENST00000411980 1574 ntBASIC7.59□□□□□ -1.2
PMS1P54277 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
PMS1P54277 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
PMS1P54277 AC017002.4-201ENST00000604721 1525 ntBASIC7.58□□□□□ -1.2
PMS1P54277 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 EPS15P1-202ENST00000459691 2071 ntBASIC7.58□□□□□ -1.2
PMS1P54277 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.58□□□□□ -1.2
PMS1P54277 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.58□□□□□ -1.2
PMS1P54277 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 CD2-201ENST00000369477 478 ntTSL 2 BASIC7.58□□□□□ -1.2
PMS1P54277 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
PMS1P54277 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
PMS1P54277 AL359715.1-201ENST00000404330 555 ntBASIC7.58□□□□□ -1.2
PMS1P54277 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.58□□□□□ -1.2
PMS1P54277 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.58□□□□□ -1.2
PMS1P54277 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.58□□□□□ -1.2
PMS1P54277 AC009500.1-201ENST00000420684 583 ntBASIC7.58□□□□□ -1.2
PMS1P54277 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 Z99127.2-201ENST00000441426 334 ntBASIC7.58□□□□□ -1.2
PMS1P54277 MTCO1P53-201ENST00000441633 699 ntBASIC7.58□□□□□ -1.2
PMS1P54277 AL355355.1-201ENST00000442900 793 ntBASIC7.58□□□□□ -1.2
PMS1P54277 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 LRRC37A14P-201ENST00000452297 462 ntBASIC7.58□□□□□ -1.2
PMS1P54277 HMGB1P26-201ENST00000452520 628 ntBASIC7.58□□□□□ -1.2
PMS1P54277 RNU7-157P-201ENST00000459600 66 ntBASIC7.58□□□□□ -1.2
PMS1P54277 RN7SL149P-201ENST00000465197 281 ntBASIC7.58□□□□□ -1.2
PMS1P54277 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.58□□□□□ -1.2
PMS1P54277 RPSAP48-201ENST00000466509 889 ntBASIC7.58□□□□□ -1.2
PMS1P54277 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.58□□□□□ -1.2
PMS1P54277 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.58□□□□□ -1.2
PMS1P54277 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 RPL12P7-201ENST00000493832 494 ntBASIC7.58□□□□□ -1.2
PMS1P54277 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC7.58□□□□□ -1.2
PMS1P54277 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
PMS1P54277 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 AC107952.1-201ENST00000524200 376 ntBASIC7.58□□□□□ -1.2
PMS1P54277 OR4A17P-201ENST00000526032 904 ntBASIC7.58□□□□□ -1.2
PMS1P54277 NDUFA3P2-201ENST00000531434 232 ntBASIC7.58□□□□□ -1.2
PMS1P54277 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.58□□□□□ -1.2
PMS1P54277 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC7.58□□□□□ -1.2
PMS1P54277 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 AL035417.2-201ENST00000603887 796 ntBASIC7.58□□□□□ -1.2
PMS1P54277 Z94722.1-201ENST00000604328 474 ntBASIC7.58□□□□□ -1.2
PMS1P54277 AC012557.2-201ENST00000605919 418 ntBASIC7.58□□□□□ -1.2
PMS1P54277 AC025171.4-201ENST00000607250 1047 ntBASIC7.58□□□□□ -1.2
PMS1P54277 AC021755.4-201ENST00000616620 456 ntBASIC7.58□□□□□ -1.2
PMS1P54277 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.58□□□□□ -1.2
PMS1P54277 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
PMS1P54277 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 UGT2B27P-201ENST00000505092 1620 ntBASIC7.58□□□□□ -1.2
PMS1P54277 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.58□□□□□ -1.2
PMS1P54277 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
PMS1P54277 AC083806.2-201ENST00000617795 2685 ntBASIC7.58□□□□□ -1.2
PMS1P54277 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
PMS1P54277 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.58□□□□□ -1.2
PMS1P54277 AL445523.1-201ENST00000451184 1362 ntBASIC7.58□□□□□ -1.2
PMS1P54277 CASC19-255ENST00000641733 1385 ntBASIC7.58□□□□□ -1.2
PMS1P54277 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.58□□□□□ -1.2
PMS1P54277 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
PMS1P54277 AC102941.1-201ENST00000567616 1537 ntBASIC7.57□□□□□ -1.2
PMS1P54277 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms