Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CASC19-228ENST00000641414 1684 ntBASIC5.85□□□□□ -1.47
SOX2P48431 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SOX2P48431 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX2P48431 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX2P48431 MKI67P1-201ENST00000604297 1460 ntBASIC5.84□□□□□ -1.47
SOX2P48431 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SOX2P48431 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SOX2P48431 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX2P48431 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SOX2P48431 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SOX2P48431 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SOX2P48431 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SOX2P48431 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX2P48431 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX2P48431 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX2P48431 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX2P48431 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.84□□□□□ -1.47
SOX2P48431 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
SOX2P48431 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX2P48431 RNA5SP301-201ENST00000362537 121 ntBASIC5.84□□□□□ -1.47
SOX2P48431 SNORD115-48-201ENST00000364764 76 ntBASIC5.84□□□□□ -1.47
SOX2P48431 SNORA70.3-201ENST00000365075 132 ntBASIC5.84□□□□□ -1.47
SOX2P48431 RNA5SP53-201ENST00000391299 120 ntBASIC5.84□□□□□ -1.47
SOX2P48431 AL049697.3-201ENST00000406493 982 ntBASIC5.84□□□□□ -1.47
SOX2P48431 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.84□□□□□ -1.47
SOX2P48431 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX2P48431 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SOX2P48431 MTND4P24-201ENST00000424002 397 ntBASIC5.84□□□□□ -1.47
SOX2P48431 UBE2D3P3-201ENST00000426992 425 ntBASIC5.84□□□□□ -1.47
SOX2P48431 ARL5AP3-201ENST00000439327 386 ntBASIC5.84□□□□□ -1.47
SOX2P48431 RPL29P7-201ENST00000440227 457 ntBASIC5.84□□□□□ -1.47
SOX2P48431 AC007000.2-201ENST00000442564 487 ntBASIC5.84□□□□□ -1.47
SOX2P48431 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.84□□□□□ -1.47
SOX2P48431 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC5.84□□□□□ -1.47
SOX2P48431 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SOX2P48431 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC5.84□□□□□ -1.47
SOX2P48431 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX2P48431 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX2P48431 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 RNU6-889P-201ENST00000517189 103 ntBASIC5.84□□□□□ -1.47
SOX2P48431 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
SOX2P48431 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.84□□□□□ -1.47
SOX2P48431 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SOX2P48431 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SOX2P48431 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 NQO1-205ENST00000561500 891 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 NDUFA3P1-201ENST00000588007 252 ntBASIC5.84□□□□□ -1.47
SOX2P48431 AC011921.2-201ENST00000589465 152 ntBASIC5.84□□□□□ -1.47
SOX2P48431 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 AL078623.1-201ENST00000602702 907 ntBASIC5.84□□□□□ -1.47
SOX2P48431 AC092032.1-201ENST00000603090 165 ntBASIC5.84□□□□□ -1.47
SOX2P48431 AC096947.1-201ENST00000603233 470 ntBASIC5.84□□□□□ -1.47
SOX2P48431 AC018754.1-201ENST00000607486 925 ntBASIC5.84□□□□□ -1.47
SOX2P48431 AC018690.1-201ENST00000608144 626 ntBASIC5.84□□□□□ -1.47
SOX2P48431 AC027449.1-201ENST00000608890 407 ntBASIC5.84□□□□□ -1.47
SOX2P48431 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.84□□□□□ -1.47
SOX2P48431 MIR6732-201ENST00000619365 60 ntBASIC5.84□□□□□ -1.47
SOX2P48431 SNORA16A-202ENST00000628458 135 ntBASIC5.84□□□□□ -1.47
SOX2P48431 OR5AU1-204ENST00000641822 1197 ntBASIC5.84□□□□□ -1.47
SOX2P48431 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.84□□□□□ -1.47
SOX2P48431 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.84□□□□□ -1.47
SOX2P48431 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.84□□□□□ -1.47
SOX2P48431 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.84□□□□□ -1.48
SOX2P48431 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
SOX2P48431 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SOX2P48431 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SOX2P48431 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.83□□□□□ -1.48
SOX2P48431 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 CUL4AP1-201ENST00000514750 1863 ntBASIC5.83□□□□□ -1.48
SOX2P48431 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.83□□□□□ -1.48
SOX2P48431 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SOX2P48431 AC005332.9-201ENST00000620266 2921 ntBASIC5.83□□□□□ -1.48
SOX2P48431 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.83□□□□□ -1.48
SOX2P48431 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX2P48431 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX2P48431 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms