Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL512637.1-201ENST00000439523 1231 ntBASIC5.46□□□□□ -1.54
CDX1P47902 AC027124.1-201ENST00000440852 466 ntBASIC5.46□□□□□ -1.54
CDX1P47902 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.46□□□□□ -1.54
CDX1P47902 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 RPL34P34-201ENST00000465389 354 ntBASIC5.46□□□□□ -1.54
CDX1P47902 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 AC022730.1-201ENST00000473114 568 ntBASIC5.46□□□□□ -1.54
CDX1P47902 RN7SL267P-201ENST00000485107 261 ntBASIC5.46□□□□□ -1.54
CDX1P47902 AC122714.1-201ENST00000502510 459 ntBASIC5.46□□□□□ -1.54
CDX1P47902 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.46□□□□□ -1.54
CDX1P47902 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.46□□□□□ -1.54
CDX1P47902 AC096661.1-201ENST00000515870 822 ntBASIC5.46□□□□□ -1.54
CDX1P47902 RNA5SP318-201ENST00000516352 92 ntBASIC5.46□□□□□ -1.54
CDX1P47902 SNORA70.17-201ENST00000516449 133 ntBASIC5.46□□□□□ -1.54
CDX1P47902 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.46□□□□□ -1.54
CDX1P47902 CARSP2-201ENST00000520688 277 ntBASIC5.46□□□□□ -1.54
CDX1P47902 GLYATL1P4-201ENST00000529326 906 ntBASIC5.46□□□□□ -1.54
CDX1P47902 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.46□□□□□ -1.54
CDX1P47902 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.46□□□□□ -1.54
CDX1P47902 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.46□□□□□ -1.54
CDX1P47902 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.46□□□□□ -1.54
CDX1P47902 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.46□□□□□ -1.54
CDX1P47902 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.46□□□□□ -1.54
CDX1P47902 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDX1P47902 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 FAM60CP-201ENST00000591086 664 ntBASIC5.46□□□□□ -1.54
CDX1P47902 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.46□□□□□ -1.54
CDX1P47902 AC022387.2-201ENST00000604050 448 ntBASIC5.46□□□□□ -1.54
CDX1P47902 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 AC016911.1-201ENST00000613297 452 ntBASIC5.46□□□□□ -1.54
CDX1P47902 AC107308.1-201ENST00000615897 301 ntBASIC5.46□□□□□ -1.54
CDX1P47902 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDX1P47902 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDX1P47902 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDX1P47902 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CDX1P47902 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDX1P47902 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDX1P47902 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CDX1P47902 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDX1P47902 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.46□□□□□ -1.54
CDX1P47902 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDX1P47902 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDX1P47902 HSPD1P1-201ENST00000503199 1726 ntBASIC5.45□□□□□ -1.54
CDX1P47902 AC116158.1-201ENST00000560231 2129 ntBASIC5.45□□□□□ -1.54
CDX1P47902 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.45□□□□□ -1.54
CDX1P47902 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.45□□□□□ -1.54
CDX1P47902 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDX1P47902 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
CDX1P47902 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CDX1P47902 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDX1P47902 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.45□□□□□ -1.54
CDX1P47902 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDX1P47902 AL358913.2-201ENST00000553881 1548 ntBASIC5.45□□□□□ -1.54
CDX1P47902 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDX1P47902 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.45□□□□□ -1.54
CDX1P47902 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDX1P47902 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDX1P47902 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDX1P47902 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.45□□□□□ -1.54
CDX1P47902 AC006511.2-201ENST00000388966 660 ntBASIC5.45□□□□□ -1.54
CDX1P47902 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.45□□□□□ -1.54
CDX1P47902 RPLP1P10-201ENST00000413972 339 ntBASIC5.45□□□□□ -1.54
CDX1P47902 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.45□□□□□ -1.54
CDX1P47902 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.45□□□□□ -1.54
CDX1P47902 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.45□□□□□ -1.54
CDX1P47902 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.45□□□□□ -1.54
CDX1P47902 AJ239321.1-201ENST00000424255 564 ntBASIC5.45□□□□□ -1.54
CDX1P47902 AC007365.2-201ENST00000428806 458 ntBASIC5.45□□□□□ -1.54
CDX1P47902 Z85994.2-201ENST00000434327 452 ntBASIC5.45□□□□□ -1.54
CDX1P47902 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.45□□□□□ -1.54
CDX1P47902 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.45□□□□□ -1.54
CDX1P47902 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDX1P47902 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.45□□□□□ -1.54
CDX1P47902 RN7SL492P-201ENST00000460700 295 ntBASIC5.45□□□□□ -1.54
CDX1P47902 RPS26P11-201ENST00000463445 348 ntBASIC5.45□□□□□ -1.54
CDX1P47902 RPS26P6-201ENST00000475156 348 ntBASIC5.45□□□□□ -1.54
CDX1P47902 AC093827.1-201ENST00000480094 861 ntBASIC5.45□□□□□ -1.54
CDX1P47902 ATG10-AS1-201ENST00000504846 648 ntBASIC5.45□□□□□ -1.54
CDX1P47902 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CDX1P47902 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.45□□□□□ -1.54
CDX1P47902 SCARNA11.1-201ENST00000516918 132 ntBASIC5.45□□□□□ -1.54
CDX1P47902 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.45□□□□□ -1.54
CDX1P47902 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.45□□□□□ -1.54
CDX1P47902 AC005000.1-201ENST00000536192 288 ntBASIC5.45□□□□□ -1.54
CDX1P47902 AL132640.1-201ENST00000559594 619 ntBASIC5.45□□□□□ -1.54
CDX1P47902 AP003115.1-201ENST00000569849 463 ntBASIC5.45□□□□□ -1.54
CDX1P47902 EIF4A3P1-201ENST00000578499 647 ntBASIC5.45□□□□□ -1.54
CDX1P47902 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.45□□□□□ -1.54
CDX1P47902 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC5.45□□□□□ -1.54
CDX1P47902 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC5.45□□□□□ -1.54
CDX1P47902 AC011447.2-201ENST00000592921 283 ntBASIC5.45□□□□□ -1.54
CDX1P47902 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.45□□□□□ -1.54
CDX1P47902 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.45□□□□□ -1.54
CDX1P47902 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.45□□□□□ -1.54
CDX1P47902 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms