Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC083862.1-201ENST00000427378 1242 ntBASIC6.3□□□□□ -1.4
SHMT2P34897 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.3□□□□□ -1.4
SHMT2P34897 RN7SL836P-201ENST00000476140 296 ntBASIC6.3□□□□□ -1.4
SHMT2P34897 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.3□□□□□ -1.4
SHMT2P34897 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.3□□□□□ -1.4
SHMT2P34897 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.3□□□□□ -1.4
SHMT2P34897 OR52K3P-201ENST00000531655 943 ntBASIC6.3□□□□□ -1.4
SHMT2P34897 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.3□□□□□ -1.4
SHMT2P34897 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.3□□□□□ -1.4
SHMT2P34897 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.3□□□□□ -1.4
SHMT2P34897 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.3□□□□□ -1.4
SHMT2P34897 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.3□□□□□ -1.4
SHMT2P34897 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SHMT2P34897 AC089999.3-201ENST00000622440 577 ntBASIC6.3□□□□□ -1.4
SHMT2P34897 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 RPL31P11-201ENST00000426558 1558 ntBASIC6.3□□□□□ -1.4
SHMT2P34897 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SHMT2P34897 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.29□□□□□ -1.4
SHMT2P34897 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.29□□□□□ -1.4
SHMT2P34897 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.29□□□□□ -1.4
SHMT2P34897 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.29□□□□□ -1.4
SHMT2P34897 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHMT2P34897 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.29□□□□□ -1.4
SHMT2P34897 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 AC121334.1-201ENST00000396414 802 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.29□□□□□ -1.4
SHMT2P34897 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.29□□□□□ -1.4
SHMT2P34897 AC096632.2-201ENST00000438139 1239 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.29□□□□□ -1.4
SHMT2P34897 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.29□□□□□ -1.4
SHMT2P34897 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.29□□□□□ -1.4
SHMT2P34897 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.29□□□□□ -1.4
SHMT2P34897 EIF4E2P2-201ENST00000492033 736 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 AC018645.1-201ENST00000505003 109 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.29□□□□□ -1.4
SHMT2P34897 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.29□□□□□ -1.4
SHMT2P34897 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.29□□□□□ -1.4
SHMT2P34897 AC011891.2-201ENST00000604949 397 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 MRPL57P1-201ENST00000621486 265 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 MIR6823-201ENST00000622118 61 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.29□□□□□ -1.4
SHMT2P34897 LINC02495-203ENST00000636704 242 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 AL121936.2-201ENST00000641935 662 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 HSPD1P8-201ENST00000400121 1658 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 AC010624.4-201ENST00000597606 1351 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SHMT2P34897 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHMT2P34897 AC006511.3-201ENST00000624929 1783 ntBASIC6.29□□□□□ -1.4
SHMT2P34897 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SHMT2P34897 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.28□□□□□ -1.4
SHMT2P34897 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHMT2P34897 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHMT2P34897 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
SHMT2P34897 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHMT2P34897 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHMT2P34897 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SHMT2P34897 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHMT2P34897 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHMT2P34897 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHMT2P34897 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHMT2P34897 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
SHMT2P34897 AC005225.5-201ENST00000623547 2225 ntBASIC6.28□□□□□ -1.4
SHMT2P34897 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.28□□□□□ -1.4
SHMT2P34897 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.28□□□□□ -1.4
SHMT2P34897 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms