Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL161729.2-201ENST00000605700 456 ntBASIC8.23□□□□□ -1.09
VARSP26640 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC8.23□□□□□ -1.09
VARSP26640 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.23□□□□□ -1.09
VARSP26640 AC010205.1-201ENST00000616668 449 ntBASIC8.23□□□□□ -1.09
VARSP26640 AC073569.3-201ENST00000619055 682 ntBASIC8.23□□□□□ -1.09
VARSP26640 REV3L-214ENST00000619481 969 ntTSL 5 BASIC8.23□□□□□ -1.09
VARSP26640 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC8.23□□□□□ -1.09
VARSP26640 MFSD8-245ENST00000641743 948 ntBASIC8.23□□□□□ -1.09
VARSP26640 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 NR1I3-205ENST00000367983 1473 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC8.23□□□□□ -1.09
VARSP26640 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.23□□□□□ -1.09
VARSP26640 AL391261.1-201ENST00000555712 1479 ntBASIC8.23□□□□□ -1.09
VARSP26640 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.23□□□□□ -1.09
VARSP26640 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
VARSP26640 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.23□□□□□ -1.09
VARSP26640 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARSP26640 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 KARSP1-201ENST00000451871 1752 ntBASIC8.22□□□□□ -1.09
VARSP26640 AC068044.1-201ENST00000441585 1978 ntBASIC8.22□□□□□ -1.09
VARSP26640 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
VARSP26640 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
VARSP26640 RNA5SP250-201ENST00000362534 119 ntBASIC8.22□□□□□ -1.09
VARSP26640 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 AC093719.1-202ENST00000392735 373 ntBASIC8.22□□□□□ -1.09
VARSP26640 AL133406.1-201ENST00000404904 747 ntBASIC8.22□□□□□ -1.09
VARSP26640 AL022332.1-201ENST00000411511 428 ntTSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 RPS26P38-201ENST00000414476 348 ntBASIC8.22□□□□□ -1.09
VARSP26640 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC8.22□□□□□ -1.09
VARSP26640 LINC00993-201ENST00000420453 540 ntBASIC8.22□□□□□ -1.09
VARSP26640 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 AC244034.1-201ENST00000428027 792 ntBASIC8.22□□□□□ -1.09
VARSP26640 ELOCP14-201ENST00000428070 331 ntBASIC8.22□□□□□ -1.09
VARSP26640 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC8.22□□□□□ -1.09
VARSP26640 ELOCP7-201ENST00000439968 331 ntBASIC8.22□□□□□ -1.09
VARSP26640 OR7E125P-201ENST00000443450 846 ntBASIC8.22□□□□□ -1.09
VARSP26640 AL512593.1-201ENST00000444758 779 ntBASIC8.22□□□□□ -1.09
VARSP26640 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC8.22□□□□□ -1.09
VARSP26640 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.22□□□□□ -1.09
VARSP26640 DBIL5P-202ENST00000453414 250 ntBASIC8.22□□□□□ -1.09
VARSP26640 RN7SL418P-201ENST00000473031 287 ntBASIC8.22□□□□□ -1.09
VARSP26640 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC8.22□□□□□ -1.09
VARSP26640 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC8.22□□□□□ -1.09
VARSP26640 ATP1B1P1-201ENST00000509767 915 ntBASIC8.22□□□□□ -1.09
VARSP26640 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 AC106774.1-201ENST00000515105 321 ntBASIC8.22□□□□□ -1.09
VARSP26640 IGHVII-30-1-201ENST00000522218 301 ntBASIC8.22□□□□□ -1.09
VARSP26640 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC8.22□□□□□ -1.09
VARSP26640 AC022690.1-201ENST00000526681 550 ntBASIC8.22□□□□□ -1.09
VARSP26640 SLC5A4P1-201ENST00000532944 612 ntBASIC8.22□□□□□ -1.09
VARSP26640 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC8.22□□□□□ -1.09
VARSP26640 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC8.22□□□□□ -1.09
VARSP26640 AC004825.1-201ENST00000555068 586 ntBASIC8.22□□□□□ -1.09
VARSP26640 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC8.22□□□□□ -1.09
VARSP26640 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC8.22□□□□□ -1.09
VARSP26640 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 RN7SL246P-201ENST00000584467 296 ntBASIC8.22□□□□□ -1.09
VARSP26640 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.22□□□□□ -1.09
VARSP26640 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC8.22□□□□□ -1.09
VARSP26640 AP001542.2-201ENST00000593141 364 ntBASIC8.22□□□□□ -1.09
VARSP26640 VN1R79P-201ENST00000593540 513 ntBASIC8.22□□□□□ -1.09
VARSP26640 AC233702.11-201ENST00000598588 333 ntBASIC8.22□□□□□ -1.09
VARSP26640 AL360085.1-201ENST00000604713 532 ntBASIC8.22□□□□□ -1.09
VARSP26640 AF146191.1-201ENST00000604941 889 ntBASIC8.22□□□□□ -1.09
VARSP26640 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC8.22□□□□□ -1.09
VARSP26640 AC005021.1-201ENST00000608730 355 ntBASIC8.22□□□□□ -1.09
VARSP26640 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC8.22□□□□□ -1.09
VARSP26640 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC8.22□□□□□ -1.09
VARSP26640 AC018816.2-201ENST00000621460 353 ntBASIC8.22□□□□□ -1.09
VARSP26640 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 SMG7-216ENST00000638826 219 ntTSL 2 BASIC8.22□□□□□ -1.09
VARSP26640 ENSA-215ENST00000638926 360 ntTSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms