Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 OR9G2P-201ENST00000533326 880 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DOBP13765 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 AP000919.1-201ENST00000582850 985 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 RPL7AP69-201ENST00000595306 806 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 SAMMSON-214ENST00000641395 1264 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DOBP13765 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DOBP13765 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DOBP13765 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DOBP13765 AP000866.6-201ENST00000638898 3579 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 TMEM75-201ENST00000624314 2165 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 SAGE3P-201ENST00000619800 1635 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 USP9YP19-201ENST00000412165 485 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC097721.1-201ENST00000427150 1253 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 COL11A2P1-205ENST00000441798 676 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AL020997.1-201ENST00000446554 349 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 PPIAP32-201ENST00000449940 472 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 NPM1P9-201ENST00000453156 844 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC093870.1-201ENST00000506837 213 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC093664.1-201ENST00000511779 289 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 KCTD9P4-201ENST00000526766 1166 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AL121579.2-201ENST00000555466 590 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC036176.3-201ENST00000602456 418 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC012065.3-201ENST00000602736 439 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 AC012175.1-201ENST00000603755 531 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 U91328.4-201ENST00000608919 517 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 MIR7854-201ENST00000620068 65 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 AL596275.2-208ENST00000641192 594 ntBASIC5.79□□□□□ -1.48
HLA-DOBP13765 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-DOBP13765 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DOBP13765 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DOBP13765 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HLA-DOBP13765 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DOBP13765 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DOBP13765 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DOBP13765 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DOBP13765 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DOBP13765 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms